RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OSGIN1Q9UJX0 560 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 TRAPPC2LQ9UL33 140 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 A0A096LPE4 126 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 A0A1W2PPZ6 126 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 TNFSF11O14788 317 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 SCGB2A1O75556 95 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 TK1P04183 234 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 CCL4P13236 92 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 RAE1P78406 368 aaKnown RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 FAM71CQ8NEG0 241 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 OR52N1Q8NH53 320 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 WDR34Q96EX3 536 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 SELENOIQ9C0D9 397 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 NAA50Q9GZZ1 169 aaKnown RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 ARL6Q9H0F7 186 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 COL11A1P12107 1806 aaPredicted RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 OR6C65A6NJZ3 312 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 TOX3O15405 576 aaPredicted RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 TNFSF8P32971 234 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 MAP2K6P52564 334 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 RPS18P62269 152 aaKnown RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 KIAA0040Q15053 153 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 ACER2Q5QJU3 275 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 RHBDD2Q6NTF9 364 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 CORO6Q6QEF8 472 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 OR4C3Q8NH37 302 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 USB1Q9BQ65 265 aaKnown RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 HDGFL3Q9Y3E1 203 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 CACNG2Q9Y698 323 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 HMX3A6NHT5 357 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SLC22A20A6NK97 555 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SLC2A10O95528 541 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 PRR35P0CG20 571 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF93P35789 620 aaPredicted RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SUMO3P55854 103 aaPredicted RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SSPNQ14714 243 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 NKG7Q16617 165 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF425Q6IV72 752 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 DND1Q8IYX4 353 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 OR2L13Q8N349 312 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 HMGCLL1Q8TB92 370 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ROBO4Q8WZ75 1007 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ZBTB8AQ96BR9 441 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 PRRT1Q99946 306 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 RIF1Q5UIP0 2472 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ZC3H12DA2A288 527 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 RP2O75695 350 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 CRYABP02511 175 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SPI1P17947 270 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 CDK2P24941 298 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 BLVRBP30043 206 aaPredicted RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ETV5P41161 510 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 MRPL19P49406 292 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 MEF2DQ14814 521 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SPCS2Q15005 226 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 EMC4Q5J8M3 183 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 WIPI1Q5MNZ9 446 aaPredicted RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 KIF18BQ86Y91 864 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 TSSK2Q96PF2 358 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 DCLRE1CQ96SD1 692 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SPIN2AQ99865 258 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SPIN2BQ9BPZ2 258 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 PDCD1LG2Q9BQ51 273 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 MED18Q9BUE0 208 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 GNG12Q9UBI6 72 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SLC5A6Q9Y289 635 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 TIMM10BQ9Y5J6 103 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 CEPT1Q9Y6K0 416 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SPAARA0A1B0GVQ0 90 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SLC22A5O76082 557 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 NKX2-2O95096 273 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 EML2O95834 649 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 S100A9P06702 114 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 GRPP07492 148 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 AVPR2P30518 371 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 THEM4Q5T1C6 240 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 GFRALQ6UXV0 394 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 VASH2Q86V25 355 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 SLC22A24Q8N4F4 322 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 FAM173AQ9BQD7 235 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF286AQ9HBT8 521 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 LHX9Q9NQ69 397 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 OCIAD1Q9NX40 245 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 KLK4Q9Y5K2 254 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF638Q14966 1978 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 AGAP14A8MT82 685 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 GUSBP08236 651 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 TBXA2RP21731 343 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 S100A1P23297 94 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 CX3CR1P49238 355 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 FGL1Q08830 312 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ANKRD37Q7Z713 158 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 TMEM99Q8N816 258 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 OR10G3Q8NGC4 313 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 TXNL4BQ9NX01 149 aaKnown RBP13.67□□□□□ -0.22
C9orf47-201ENST00000334490 EHFQ9NZC4 300 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 PIGLQ9Y2B2 252 aa13.67□□□□□ -0.22
C9orf47-201ENST00000334490 ARPC1BO15143 372 aaKnown RBP13.66□□□□□ -0.22
C9orf47-201ENST00000334490 CRYAAP02489 173 aa13.66□□□□□ -0.22
C9orf47-201ENST00000334490 TFAP2AP05549 437 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms