RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 CLDN34H7C241 214 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 BSGP35613 385 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CCR6P51684 374 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 RPS24P62847 133 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 MANEAQ5SRI9 462 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CLDN19Q8N6F1 224 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 BOLLQ8N9W6 283 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 LMX1AQ8TE12 382 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CCDC74AQ96AQ1 378 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 APH1AQ96BI3 265 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 TRIB1Q96RU8 372 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 MAP3K3Q99759 626 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 TIMM29Q9BSF4 260 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 KIAA1324LA8MWY0 1029 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 UBE2IP63279 158 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 OC90Q02509 493 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 RPS27LQ71UM5 84 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 EXD3Q8N9H8 876 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 LMNTD1Q8N9Z9 388 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 KCNE4Q8WWG9 221 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SLC35E1Q96K37 410 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 RPL10LQ96L21 214 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SMOQ99835 787 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SLX4Q8IY92 1834 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SNRPBP14678 240 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 HOXA11P31270 313 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 IL2RGP31785 369 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 OR11L1Q8NGX0 322 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CREB3L4Q8TEY5 395 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 EXTL1Q92935 676 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SMIM19Q96E16 107 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 YIPF6Q96EC8 236 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 RHOFQ9HBH0 211 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 NKX6-3A6NJ46 265 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SLC22A20A6NK97 555 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SULT2B1O00204 365 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 GPR31O00270 319 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 LEFTY1O75610 366 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 FAM3BP58499 235 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ISL1P61371 349 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 EXT1Q16394 746 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 C15orf39Q6ZRI6 1047 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 H2BFWTQ7Z2G1 175 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 PKD1L3Q7Z443 1732 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CCDC190Q86UF4 302 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF429Q86V71 674 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ZDHHC22Q8N966 263 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 FIBINQ8TAL6 211 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 IFI44Q8TCB0 444 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 DLL4Q9NR61 685 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 DNAJB11Q9UBS4 358 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SLCO1B1Q9Y6L6 691 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 PLSCR5A0PG75 271 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ST8SIA5O15466 376 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 XRCC3O43542 346 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ZNF354AO60765 605 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 LIPAP38571 399 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ASCL1P50553 236 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 Q1RN00 199 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 TMEM229BQ8NBD8 167 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 NUDCD2Q8WVJ2 157 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 RPUSD4Q96CM3 377 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CLCF1Q9UBD9 225 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 KIR2DS5A0A0G2JLQ3 304 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 A0A0G2JNG1 304 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 DUXBA0A1W2PPF3 345 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 MEIS3P1A6NDR6 274 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 KIR2DS3K7RE56 304 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SCO2O43819 266 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 BMI1P35226 326 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 KIR2DS5Q14953 304 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 STUMQ69YW2 141 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 L3MBTL4Q8NA19 623 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CPEB3Q8NE35 698 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 OR5AP2Q8NGF4 316 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 OR10C1Q96KK4 312 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 FAAP24Q9BTP7 215 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SUCNR1Q9BXA5 334 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SHARPINQ9H0F6 387 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 CA14Q9ULX7 337 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 BAZ2AQ9UIF9 1905 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 YIF1AO95070 293 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 FCGR2AP12318 317 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 KIR2DS2P43631 304 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 GALR1P47211 349 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SPINT3P49223 89 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 EVX2Q03828 476 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 RANBP10Q6VN20 620 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 UBE3DQ7Z6J8 389 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 GABRG1Q8N1C3 465 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 NAA50Q9GZZ1 169 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 HRASLSQ9HDD0 168 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SSUH2Q9Y2M2 353 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 SERPINE3A8MV23 424 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ABCD4O14678 606 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 PLRG1O43660 514 aaKnown RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 NME2P1O60361 137 aa5.1□□□□□ -1.59
PTPRB-202ENST00000334414 GALR3O60755 368 aaPredicted RBP5.1□□□□□ -1.59
PTPRB-202ENST00000334414 ATXN1LP0C7T5 689 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms