RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CD47Q08722 323 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 ZNF691Q5VV52 312 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 LINC00299Q6ZSB3 139 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 OR6V1Q8N148 313 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 ANKRD60Q9BZ19 345 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 SRA1Q9HD15 236 aaKnown RBP14.58□□□□□ -0.07
SHOX-201ENST00000334060 CMC2Q9NRP2 79 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 ASB6Q9NWX5 421 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 FOXD3Q9UJU5 478 aaPredicted RBP14.58□□□□□ -0.07
SHOX-201ENST00000334060 PRR14LQ5THK1 2151 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 SLC22A23A1A5C7 686 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 SH3D21A4FU49 640 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 TRIM64BA6NI03 449 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 WBP4O75554 376 aaKnown RBP14.58□□□□□ -0.08
SHOX-201ENST00000334060 VAMP5O95183 116 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 CGAP01215 116 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 PCYT1AP49585 367 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 ISL1P61371 349 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 RBPJQ06330 500 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 ITGADQ13349 1161 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 MEP1BQ16820 701 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 FAM214BQ7L5A3 538 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 SLC43A2Q8N370 569 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 RELL2Q8NC24 303 aaPredicted RBP14.58□□□□□ -0.08
SHOX-201ENST00000334060 TRUB1Q8WWH5 349 aaKnown RBP14.58□□□□□ -0.08
SHOX-201ENST00000334060 CCDC120Q96HB5 630 aa14.58□□□□□ -0.08
SHOX-201ENST00000334060 GMPPAQ96IJ6 420 aaPredicted RBP14.58□□□□□ -0.08
SHOX-201ENST00000334060 NOL3O60936 208 aaKnown RBP14.57□□□□□ -0.08
SHOX-201ENST00000334060 FMO3P31513 532 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 GRK5P34947 590 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 SNTB1Q13884 538 aaKnown RBP14.57□□□□□ -0.08
SHOX-201ENST00000334060 RNPS1Q15287 305 aaKnown RBP14.57□□□□□ -0.08
SHOX-201ENST00000334060 TFAP2EQ6VUC0 442 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 DCDC5Q6ZRR9 648 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.57□□□□□ -0.08
SHOX-201ENST00000334060 LUZP2Q86TE4 346 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 NOXO1Q8NFA2 376 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 OR6X1Q8NH79 312 aa14.57□□□□□ -0.08
SHOX-201ENST00000334060 PRSS37A4D1T9 235 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ZNF724A8MTY0 619 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 MRPL33O75394 65 aaKnown RBP14.56□□□□□ -0.08
SHOX-201ENST00000334060 IL5RAQ01344 420 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ANKDD1AQ495B1 522 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 RPL13AP3Q6NVV1 102 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 SHFQ7M4L6 423 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ZNF610Q8N9Z0 462 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 MCHR2Q969V1 340 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 SLC25A44Q96H78 314 aaPredicted RBP14.56□□□□□ -0.08
SHOX-201ENST00000334060 LRR1Q96L50 414 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 OR51V1Q9H2C8 321 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 TRIM64A6NGJ6 449 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 SLC16A7O60669 478 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ENTPD6O75354 484 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 FCGR2AP12318 317 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 TIMP3P35625 211 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 DAP3P51398 398 aaKnown RBP14.56□□□□□ -0.08
SHOX-201ENST00000334060 TMEM201Q5SNT2 666 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 TMEM53Q6P2H8 277 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ZNF474Q6S9Z5 364 aaPredicted RBP14.56□□□□□ -0.08
SHOX-201ENST00000334060 C20orf196Q8IYI0 205 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ZNF555Q8NEP9 628 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ZNF566Q969W8 418 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ISOC1Q96CN7 298 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 PLEKHA8Q96JA3 519 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 RDH12Q96NR8 316 aa14.56□□□□□ -0.08
SHOX-201ENST00000334060 ERRFI1Q9UJM3 462 aaPredicted RBP14.56□□□□□ -0.08
SHOX-201ENST00000334060 TVP23AA6NH52 213 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 E9PLN8 166 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 IL2RAP01589 272 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 QDPRP09417 244 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 ENTPD1P49961 510 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 CLRN1P58418 232 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 FAPQ12884 760 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 KEAP1Q14145 624 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 MAD2L1BPQ15013 274 aaPredicted RBP14.55□□□□□ -0.08
SHOX-201ENST00000334060 HIST3H3Q16695 136 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 JAZF1Q86VZ6 243 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 ZNF511Q8NB15 262 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 GALNT11Q8NCW6 608 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 TMEM163Q8TC26 289 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 KISS1RQ969F8 398 aaPredicted RBP14.55□□□□□ -0.08
SHOX-201ENST00000334060 TMEM54Q969K7 222 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 TMEM45BQ96B21 275 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 TM9SF2Q99805 663 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 VKORC1Q9BQB6 163 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 NMNAT2Q9BZQ4 307 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 CRLF2Q9HC73 371 aa14.55□□□□□ -0.08
SHOX-201ENST00000334060 COA3Q9Y2R0 106 aaPredicted RBP14.55□□□□□ -0.08
SHOX-201ENST00000334060 ZNF503-AS2A6NEH8 195 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 CCDC182A6NF36 153 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 ZNF726A6NNF4 738 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 XPNPEP2O43895 674 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 APEHP13798 732 aaKnown RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 SPI1P17947 270 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 DCKP27707 260 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 GRNP28799 593 aaKnown RBP14.54□□□□□ -0.08
SHOX-201ENST00000334060 HCCSP53701 268 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 SRSF1Q07955 248 aaKnown RBP eCLIP14.54□□□□□ -0.08
SHOX-201ENST00000334060 RGS21Q2M5E4 152 aa14.54□□□□□ -0.08
SHOX-201ENST00000334060 KLHL12Q53G59 568 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms