RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 SLC35A4Q96G79 324 aa16.52■□□□□ 0.24
PKP3-201ENST00000331563 GAS2L1Q99501 681 aaPredicted RBP16.52■□□□□ 0.24
PKP3-201ENST00000331563 SPOCK3Q9BQ16 436 aa16.52■□□□□ 0.24
PKP3-201ENST00000331563 ZNF559Q9BR84 538 aa16.52■□□□□ 0.24
PKP3-201ENST00000331563 HAO2Q9NYQ3 351 aa16.52■□□□□ 0.24
PKP3-201ENST00000331563 NCDNQ9UBB6 729 aa16.52■□□□□ 0.24
PKP3-201ENST00000331563 PRICKLE3O43900 615 aaPredicted RBP16.52■□□□□ 0.23
PKP3-201ENST00000331563 ZFPL1O95159 310 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 KAT7O95251 611 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 ZNF14P17017 642 aaPredicted RBP16.52■□□□□ 0.23
PKP3-201ENST00000331563 CD34P28906 385 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 GDI1P31150 447 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 P2RY2P41231 377 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 PCP4P48539 62 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 ZNF345Q14585 488 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 OR1Q1Q15612 314 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 STEAP1BQ6NZ63 245 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 OR10R2Q8NGX6 335 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 WFIKKN2Q8TEU8 576 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 PHYHIPQ92561 330 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 TNFRSF13CQ96RJ3 184 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 MRI1Q9BV20 369 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 LGR4Q9BXB1 951 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 ZDHHC5Q9C0B5 715 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 MEPEQ9NQ76 525 aaPredicted RBP16.52■□□□□ 0.23
PKP3-201ENST00000331563 PRSS16Q9NQE7 514 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 ZNF223Q9UK11 482 aaPredicted RBP16.52■□□□□ 0.23
PKP3-201ENST00000331563 FAM96BQ9Y3D0 163 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 CBY1Q9Y3M2 126 aa16.52■□□□□ 0.23
PKP3-201ENST00000331563 A0A0A6YYD5 115 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 CENPVL1A0A0U1RR11 272 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 EDDM13A0A1B0GTR0 161 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 A0A1B0GVT2 93 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 A0A1W2PR48 441 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 XRCC3O43542 346 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 APEHP13798 732 aaKnown RBP16.51■□□□□ 0.23
PKP3-201ENST00000331563 CASRP41180 1078 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 RBP2P50120 134 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 ATP1B3P54709 279 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 PRAMEF17Q5VTA0 474 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 ZNF547Q8IVP9 402 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 STOML3Q8TAV4 291 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 MOAP1Q96BY2 351 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 C14orf79Q96F83 325 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 HSPA12BQ96MM6 686 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 ACTRT3Q9BYD9 372 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 TOLLIPQ9H0E2 274 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 MTHFD2LQ9H903 347 aaPredicted RBP16.51■□□□□ 0.23
PKP3-201ENST00000331563 SMCO4Q9NRQ5 59 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 UQCC1Q9NVA1 299 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 PLXNA2O75051 1894 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 GXYLT2A0PJZ3 443 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 RNF222A6NCQ9 220 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 IGLON5A6NGN9 336 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 ERI3O43414 337 aaKnown RBP16.51■□□□□ 0.23
PKP3-201ENST00000331563 LATO43561 262 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 ITGA3P26006 1051 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 NDUFS1P28331 727 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 RAB4BP61018 213 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 OR1J2Q8NGS2 313 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 SLC39A7Q92504 469 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 SLAMF9Q96A28 289 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 ETV7Q9Y603 341 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 VPS13AQ96RL7 3174 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 A0A087WV48 116 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 GGT3PA6NGU5 568 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 PRKXP51817 358 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 SKP2Q13309 424 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 PRRT3Q5FWE3 981 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 REC114Q7Z4M0 266 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 CA5BP1Q8WTZ4 195 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 NAA11Q9BSU3 229 aaPredicted RBP16.51■□□□□ 0.23
PKP3-201ENST00000331563 PCDHGA1Q9Y5H4 931 aa16.51■□□□□ 0.23
PKP3-201ENST00000331563 SDK1Q7Z5N4 2213 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 TBC1D3EA0A087X179 549 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 PPIHO43447 177 aaKnown RBP16.5■□□□□ 0.23
PKP3-201ENST00000331563 PCCBP05166 539 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 RCC1P18754 421 aaPredicted RBP16.5■□□□□ 0.23
PKP3-201ENST00000331563 PRSS3P35030 304 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 AIMP2Q13155 320 aaKnown RBP16.5■□□□□ 0.23
PKP3-201ENST00000331563 SCGB2B2Q4G0G5 96 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 C2orf27AQ580R0 203 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 CYB5R2Q6BCY4 276 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 YAF2Q8IY57 180 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 OR5M8Q8NGP6 311 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 TFGQ92734 400 aaPredicted RBP16.5■□□□□ 0.23
PKP3-201ENST00000331563 HIST1H2BAQ96A08 127 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 ZNF764Q96H86 408 aaPredicted RBP16.5■□□□□ 0.23
PKP3-201ENST00000331563 PELI2Q9HAT8 420 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 ADAM29Q9UKF5 820 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 ZNF136P52737 540 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 CXADRP78310 365 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 HYAL1Q12794 435 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 ERN2Q76MJ5 926 aaKnown RBP16.5■□□□□ 0.23
PKP3-201ENST00000331563 TMEM200AQ86VY9 491 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 ZNF227Q86WZ6 799 aa16.5■□□□□ 0.23
PKP3-201ENST00000331563 NUP210Q8TEM1 1887 aaPredicted RBP16.49■□□□□ 0.23
PKP3-201ENST00000331563 TRIOBPQ9H2D6 2365 aa16.49■□□□□ 0.23
PKP3-201ENST00000331563 M0QYG6 137 aa16.49■□□□□ 0.23
PKP3-201ENST00000331563 TCAPO15273 167 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms