RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ECDO95905 644 aaPredicted RBP13.11□□□□□ -0.31
TPM3-206ENST00000330188 ANXA2P07355 339 aaKnown RBP13.11□□□□□ -0.31
TPM3-206ENST00000330188 IL11P20809 199 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 CSRP1P21291 193 aaKnown RBP13.11□□□□□ -0.31
TPM3-206ENST00000330188 CDK2P24941 298 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 MNDAP41218 407 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 ART1P52961 327 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 FBXW4P57775 412 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 TMEM69Q5SWH9 247 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 C5orf46Q6UWT4 87 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.11□□□□□ -0.31
TPM3-206ENST00000330188 ZNF679Q8IYX0 411 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 EID2Q8N6I1 236 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 OR8K3Q8NH51 312 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 OR56B4Q8NH76 319 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 RNF128Q8TEB7 428 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 GIMAP1Q8WWP7 306 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 MCHR2Q969V1 340 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 C8orf44Q96CB5 159 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 HYLS1Q96M11 299 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 EMC7Q9NPA0 242 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 KLK11Q9UBX7 282 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 SDK1Q7Z5N4 2213 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 C2orf72A6NCS6 295 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 ANKUB1A6NFN9 424 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 CCDC85CA6NKD9 419 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 OR2T1O43869 369 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 TIAF1O95411 115 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 HEXBP07686 556 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 SPARCP09486 303 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 PTHLHP12272 177 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 HLA-DOBP13765 273 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 CXCL12P48061 93 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 BLVRAP53004 296 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 ST3GAL2Q16842 350 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 TEX30Q5JUR7 227 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 SLC18B1Q6NT16 456 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 THAP3Q8WTV1 239 aaPredicted RBP13.1□□□□□ -0.31
TPM3-206ENST00000330188 DEDD2Q8WXF8 326 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 TMEM234Q8WY98 164 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 ACTR6Q9GZN1 396 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 C20orf85Q9H1P6 137 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 CABIN1Q9Y6J0 2220 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 TMEM265A0A087WTH1 108 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 WNT11O96014 354 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 PNPP00491 289 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 TMIGD3P0DMS9 266 aaPredicted RBP13.1□□□□□ -0.31
TPM3-206ENST00000330188 ARRB1P49407 418 aaPredicted RBP13.1□□□□□ -0.31
TPM3-206ENST00000330188 TAS2R20P59543 309 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 SNRPD2P62316 118 aaKnown RBP13.1□□□□□ -0.31
TPM3-206ENST00000330188 ADAM8P78325 824 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 MRPS10P82664 201 aaKnown RBP13.1□□□□□ -0.31
TPM3-206ENST00000330188 ROM1Q03395 351 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 PLA2G7Q13093 441 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 C6orf183Q5T699 404 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 SFRP4Q6FHJ7 346 aaPredicted RBP13.1□□□□□ -0.31
TPM3-206ENST00000330188 ZNF227Q86WZ6 799 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 GRPEL2Q8TAA5 225 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 FCAMRQ8WWV6 532 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 MS4A3Q96HJ5 214 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 STEAP1Q9UHE8 339 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 ZNF222Q9UK12 451 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 SLC22A13Q9Y226 551 aa13.1□□□□□ -0.31
TPM3-206ENST00000330188 VCANP13611 3396 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ANKRD20A5PA0PJZ0 165 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 MS4A18H0YCH9 400 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ALOX12BO75342 701 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 SYPP08247 313 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 CXCL3P19876 107 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 SCAND1P57086 179 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 AP3S2P59780 193 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ACY1Q03154 408 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 NKAIN1Q4KMZ8 207 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 KDM8Q8N371 416 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 C9orf62Q8N4C0 152 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 BEST4Q8NFU0 473 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 OR11G2Q8NGC1 345 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 OR6S1Q8NH40 331 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 NUBPLQ8TB37 319 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 TSEN15Q8WW01 171 aaKnown RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 ST8SIA1Q92185 356 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 HGDQ93099 445 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 OR6C1Q96RD1 312 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 PRO3102Q9H379 93 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ZFP64Q9NPA5 681 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 STMN3Q9NZ72 180 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 SUSD2Q9UGT4 822 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 HSPB11Q9Y547 144 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 ADAMTS9Q9P2N4 1935 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 SOX1O00570 391 aaPredicted RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 KHDRBS3O75525 346 aaKnown RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 LDOC1O95751 146 aaPredicted RBP13.09□□□□□ -0.31
TPM3-206ENST00000330188 ANXA3P12429 323 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 CFPP27918 469 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 PUDPQ08623 228 aa13.09□□□□□ -0.31
TPM3-206ENST00000330188 C17orf67Q0P5P2 114 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms