RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 MTFR2Q6P444 385 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 XKRXQ6PP77 449 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 PXKQ7Z7A4 578 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 ARIH2OSQ8N7S6 290 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 NAXEQ8NCW5 288 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 OR2T4Q8NH00 348 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 OR4K13Q8NH42 304 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 YIPF3Q9GZM5 350 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 CXorf56Q9H5V9 222 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 CHST11Q9NPF2 352 aa14.64□□□□□ -0.07
PDLIM1-201ENST00000329399 A0A1W2PNV4 684 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 OR2M5A3KFT3 312 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 CCDC182A6NF36 153 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 FAM183AA6NL82 134 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 FIGNL2A6NMB9 653 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 M0R082 166 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 RNF13O43567 381 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 EIF1BO60739 113 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 WDR1O75083 606 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 GLCEO94923 617 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 PMS2P2O95744 297 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SBK2P0C263 348 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 OR2T7P0C7T2 308 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 CPN1P15169 458 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SUCLG1P53597 346 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 TUBA1BP68363 451 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SLC35A1P78382 337 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 GPR50Q13585 617 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 KRR1Q13601 381 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 KLHL12Q53G59 568 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SP5Q6BEB4 398 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 TUBA1AQ71U36 451 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 OR2T27Q8NH04 317 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 RND1Q92730 232 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SFXN2Q96NB2 322 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 OR51V1Q9H2C8 321 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SIAEQ9HAT2 523 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 ERVK13-1Q9NX77 482 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 ADAM18Q9Y3Q7 739 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 TEX13CA0A0J9YWL9 993 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 NKX2-6A6NCS4 301 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 AHRRA9YTQ3 701 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 CENPBD1B2RD01 187 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 PRSS44E7EML9 344 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 AKAP8O43823 692 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 EFNA2O43921 213 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 ACTL6AO96019 429 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 OPN1LWP04000 364 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 CD53P19397 219 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 IL11P20809 199 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 CLDN20P56880 219 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 RAC1P63000 192 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 GALEQ14376 348 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 TMEM211Q6ICI0 200 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 LEG1Q6P5S2 330 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 LINC00299Q6ZSB3 139 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 SDR9C7Q8NEX9 313 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 BBS1Q8NFJ9 593 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF417Q8TAU3 575 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 FNDC8Q8TC99 324 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 KISS1RQ969F8 398 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 Q96M85 177 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF587Q96SQ5 575 aaPredicted RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 COQ7Q99807 217 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 OR11A1Q9GZK7 315 aa14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF346Q9UL40 294 aaKnown RBP14.63□□□□□ -0.07
PDLIM1-201ENST00000329399 POLQO75417 2590 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 ARHGAP21Q5T5U3 1957 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 VAMP5O95183 116 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 CLDN14O95500 239 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 LIMS3P0CW19 117 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 LIMS4P0CW20 117 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 CPEP16870 476 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 ZNF708P17019 499 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 SPI1P17947 270 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 AGAP20933 346 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 PSMA1P25786 263 aaKnown RBP14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 TGFBR2P37173 567 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 ETV1P50549 477 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 SLC16A1P53985 500 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 TAS2R43P59537 309 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 CSNK2A1P68400 391 aaPredicted RBP14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 TPBGQ13641 420 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 OR7A5Q15622 319 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 CTF1Q16619 201 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 RAET1LQ5VY80 246 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 SLC16A12Q6ZSM3 486 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 ADGRE4PQ86SQ3 457 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 IGFN1Q86VF2 1251 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 OR51G2Q8NGK0 314 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 LILRB4Q8NHJ6 448 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 TSPAN32Q96QS1 320 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 TRIB1Q96RU8 372 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 NMNAT3Q96T66 252 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 CNN2Q99439 309 aaKnown RBP14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 VSX1Q9NZR4 365 aaPredicted RBP14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 FKBP7Q9Y680 259 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 MED12LQ86YW9 2145 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 DOCK7Q96N67 2140 aa14.62□□□□□ -0.07
PDLIM1-201ENST00000329399 DAPL1A0PJW8 107 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms