RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 FAM160A2Q8N612 972 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 ARIH2OSQ8N7S6 290 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 ST8SIA4Q92187 359 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 OR2A5Q96R48 311 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 SEMA4CQ9C0C4 833 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 C1orf198Q9H425 327 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 SCPEP1Q9HB40 452 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 DKKL1Q9UK85 242 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF346Q9UL40 294 aaKnown RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 HS3ST3A1Q9Y663 406 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 A0A087WUJ7 227 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 ARPC3O15145 178 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 ZFPL1O95159 310 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 HTR3BO95264 441 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 TPMTP51580 245 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 RPL27P61353 136 aaKnown RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 BTG2P78543 158 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 TMEM240Q5SV17 173 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 LINC00346Q8IVM7 164 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 GABRG1Q8N1C3 465 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 MFSD8Q8NHS3 518 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 OR5B2Q96R09 309 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 PDCD11Q14690 1871 aaKnown RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 TSPAN15O95858 294 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 SMAD2Q15796 467 aaKnown RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 KIAA0895LQ68EN5 471 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 GLDNQ6ZMI3 551 aaPredicted RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 NKAIN3Q8N8D7 197 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 CHAC2Q8WUX2 184 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 WFDC6Q9BQY6 131 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 KIF25Q9UIL4 384 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 RAB22AQ9UL26 194 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 MMACHCQ9Y4U1 282 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 F5H5K5 113 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 P2RY10O00398 339 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 BHLHE40O14503 412 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 CD3DP04234 171 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 IL5P05113 134 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 SERPINA5P05154 406 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 EEF1A1P68104 462 aaKnown RBP13.45□□□□□ -0.26
TCOF1-201ENST00000323668 EGR3Q06889 387 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 SLC9A3R2Q15599 337 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 C2orf76Q3KRA6 126 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 LCN10Q6JVE6 187 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 MARCH3Q86UD3 253 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF160Q9HCG1 818 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 OR52A1Q9UKL2 312 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 SLC7A11Q9UPY5 501 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 RHBDD3Q9Y3P4 386 aa13.45□□□□□ -0.26
TCOF1-201ENST00000323668 TMEM200CA6NKL6 621 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 HSPA12AO43301 675 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 HYAL3O43820 417 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-201ENST00000323668 SNAPINO95295 136 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 CLDN6P56747 220 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 PAPD4Q6PIY7 484 aaKnown RBP13.44□□□□□ -0.26
TCOF1-201ENST00000323668 DND1Q8IYX4 353 aaKnown RBP13.44□□□□□ -0.26
TCOF1-201ENST00000323668 SLC22A24Q8N4F4 322 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 TEX19Q8NA77 164 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 DHCR7Q9UBM7 475 aaKnown RBP13.44□□□□□ -0.26
TCOF1-201ENST00000323668 SLC22A23A1A5C7 686 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 XRCC3O43542 346 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 NAGAP17050 411 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF679Q8IYX0 411 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 OR4C16Q8NGL9 310 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 TOMM40LQ969M1 308 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 FGGYQ96C11 551 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 HRH4Q9H3N8 390 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 D6RAR5 112 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 DVL2O14641 736 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 STK17BO94768 372 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 HOXB5P09067 269 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 PTHLHP12272 177 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 CD1CP29017 333 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 TMEM196Q5HYL7 178 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 C1orf140Q5VVS0 124 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 C9orf62Q8N4C0 152 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 FNDC9Q8TBE3 224 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 SDHCQ99643 169 aaPredicted RBP13.44□□□□□ -0.26
TCOF1-201ENST00000323668 ZNF416Q9BWM5 594 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 LSM5Q9Y4Y9 91 aaKnown RBP13.44□□□□□ -0.26
TCOF1-201ENST00000323668 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 LRRC37A2A6NM11 1700 aa13.44□□□□□ -0.26
TCOF1-201ENST00000323668 PYCARD-AS1I3L0S3 204 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 PRICKLE3O43900 615 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 OPN1LWP04000 364 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 CXCL3P19876 107 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 SDHBP21912 280 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 CAMLGP49069 296 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 DHPSP49366 369 aaPredicted RBP13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ACKR1Q16570 336 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RAET1LQ5VY80 246 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 UNQ6126/PRO20091Q6UXV3 157 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 OR52B4Q8NGK2 314 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 RNF170Q96K19 258 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 ARPC5LQ9BPX5 153 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 SYT3Q9BQG1 590 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 NUDT22Q9BRQ3 303 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 SLC5A7Q9GZV3 580 aa13.43□□□□□ -0.26
TCOF1-201ENST00000323668 FKRPQ9H9S5 495 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms