RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 COX15Q7KZN9 410 aa20.15■□□□□ 0.82
PNKP-201ENST00000322344 ZNF454Q8N9F8 522 aa20.15■□□□□ 0.82
PNKP-201ENST00000322344 DNAAF1Q8NEP3 725 aa20.15■□□□□ 0.82
PNKP-201ENST00000322344 OR10AC1Q8NH08 325 aa20.15■□□□□ 0.82
PNKP-201ENST00000322344 GCDHQ92947 438 aaPredicted RBP20.15■□□□□ 0.82
PNKP-201ENST00000322344 GPR137Q96N19 417 aa20.15■□□□□ 0.82
PNKP-201ENST00000322344 MGAT4AQ9UM21 535 aa20.15■□□□□ 0.82
PNKP-201ENST00000322344 CXCL3P19876 107 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 CSRP1P21291 193 aaKnown RBP20.14■□□□□ 0.81
PNKP-201ENST00000322344 BCKDHBP21953 392 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 HTR2BP41595 481 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 METTL11BQ5VVY1 283 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 RHBDD2Q6NTF9 364 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 RABEPKQ7Z6M1 372 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 ST8SIA1Q92185 356 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 SNAPC3Q92966 411 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 DNAJA3Q96EY1 480 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 SEMA4CQ9C0C4 833 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 MRPL22Q9NWU5 206 aaKnown RBP20.14■□□□□ 0.81
PNKP-201ENST00000322344 KLK11Q9UBX7 282 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 ING1Q9UK53 422 aaPredicted RBP20.14■□□□□ 0.81
PNKP-201ENST00000322344 FBXL3Q9UKT7 428 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 A0A1B0GUH1 482 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 XRCC3O43542 346 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 WISP1O95388 367 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 SPARCP09486 303 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 GIMD1P0DJR0 217 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 SUMO3P55854 103 aaPredicted RBP20.14■□□□□ 0.81
PNKP-201ENST00000322344 MFSD13AQ14CX5 517 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 COL28A1Q2UY09 1125 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 ZNF248Q8NDW4 579 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 ZNF587Q96SQ5 575 aaPredicted RBP20.14■□□□□ 0.81
PNKP-201ENST00000322344 SLC7A5P2Q9GIP4 190 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 NKIRAS2Q9NYR9 191 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 NPTNQ9Y639 398 aa20.14■□□□□ 0.81
PNKP-201ENST00000322344 ANKUB1A6NFN9 424 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 A6NIZ1 184 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 ADAM10O14672 748 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 RAP1BP61224 184 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 RAP1AP62834 184 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 KRT77Q7Z794 578 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 OR51A4Q8NGJ6 313 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 STT3BQ8TCJ2 826 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 C8orf44Q96CB5 159 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 ULBP3Q9BZM4 244 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 SCP2D1Q9UJQ7 156 aa20.13■□□□□ 0.81
PNKP-201ENST00000322344 IGLV3-12A0A075B6K2 115 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 FTCDNL1E5RQL4 147 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 CTLA4P16410 223 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 RIDAP52758 137 aaKnown RBP20.12■□□□□ 0.81
PNKP-201ENST00000322344 RPS15P62841 145 aaKnown RBP20.12■□□□□ 0.81
PNKP-201ENST00000322344 ADAM8P78325 824 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 ZP4Q12836 540 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 SLC35D2Q76EJ3 337 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 BEST4Q8NFU0 473 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 NUDT22Q9BRQ3 303 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 UTP23Q9BRU9 249 aaKnown RBP20.12■□□□□ 0.81
PNKP-201ENST00000322344 SLC22A11Q9NSA0 550 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 GON4LQ3T8J9 2241 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 GLO1Q04760 184 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 C17orf67Q0P5P2 114 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 TMEM255AQ5JRV8 349 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 ANKRD16Q6P6B7 361 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 KANSL1Q7Z3B3 1105 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 MED30Q96HR3 178 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 OR11A1Q9GZK7 315 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 WNT16Q9UBV4 365 aa20.12■□□□□ 0.81
PNKP-201ENST00000322344 CDV3Q9UKY7 258 aaKnown RBP20.12■□□□□ 0.81
PNKP-201ENST00000322344 FAUP35544 74 aaKnown RBP20.11■□□□□ 0.81
PNKP-201ENST00000322344 ACY1Q03154 408 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 EIF2B1Q14232 305 aaKnown RBP20.11■□□□□ 0.81
PNKP-201ENST00000322344 ODF4Q2M2E3 257 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 TMEM71Q6P5X7 295 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 DNM1P34Q6PK57 102 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 GLB1L2Q8IW92 636 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 PIAS4Q8N2W9 510 aaPredicted RBP20.11■□□□□ 0.81
PNKP-201ENST00000322344 OR8K3Q8NH51 312 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 NUBPLQ8TB37 319 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 ATOH1Q92858 354 aaPredicted RBP20.11■□□□□ 0.81
PNKP-201ENST00000322344 NXPE2Q96DL1 559 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 DUSP15Q9H1R2 295 aaPredicted RBP20.11■□□□□ 0.81
PNKP-201ENST00000322344 OR10A4Q9H209 315 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 DIABLOQ9NR28 239 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 DLL4Q9NR61 685 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 SLC17A5Q9NRA2 495 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 TAS2R8Q9NYW2 309 aa20.11■□□□□ 0.81
PNKP-201ENST00000322344 HPXP02790 462 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 MYF5P13349 255 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 CCKBRP32239 447 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 APOBEC1P41238 236 aaKnown RBP20.1■□□□□ 0.81
PNKP-201ENST00000322344 VEGFCP49767 419 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 DLX5P56178 289 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 THOC7Q6I9Y2 204 aaKnown RBP20.1■□□□□ 0.81
PNKP-201ENST00000322344 ANKRD37Q7Z713 158 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 ABHD6Q9BV23 337 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 NOX3Q9HBY0 568 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 NPIPB13A6NJU9 1138 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 NPIPB4C9JG80 1138 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 SLC17A2O00624 439 aa20.1■□□□□ 0.81
PNKP-201ENST00000322344 RBBP9O75884 186 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms