RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 MUC20Q8N307 709 aaPredicted RBP7.87□□□□□ -1.15
CLK1-201ENST00000321356 CLEC1AQ8NC01 280 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 OR8K3Q8NH51 312 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 RNF128Q8TEB7 428 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 GPX8Q8TED1 209 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 ZDHHC1Q8WTX9 485 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 PTPMT1Q8WUK0 201 aaPredicted RBP7.87□□□□□ -1.15
CLK1-201ENST00000321356 TCTN2Q96GX1 697 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 PBX4Q9BYU1 374 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 ULBP3Q9BZM4 244 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 LAT2Q9GZY6 243 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 ALX4Q9H161 411 aaPredicted RBP7.87□□□□□ -1.15
CLK1-201ENST00000321356 NXF5Q9H1B4 397 aaKnown RBP7.87□□□□□ -1.15
CLK1-201ENST00000321356 SYT4Q9H2B2 425 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 C1orf198Q9H425 327 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 KCNG2Q9UJ96 466 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 COL5A1P20908 1838 aaPredicted RBP7.87□□□□□ -1.15
CLK1-201ENST00000321356 CPAMD8Q8IZJ3 1885 aa7.87□□□□□ -1.15
CLK1-201ENST00000321356 LOC100289279A0A1B0GTE1 492 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 TCRBV21S2A2A0A5A6 115 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 EPOPA6NHQ4 379 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 A8MXK9 166 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 C17orf105B2RV13 164 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 F5H5P2 479 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 ARPC5O15511 151 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 CDC40O60508 579 aaKnown RBP eCLIP7.86□□□□□ -1.15
CLK1-201ENST00000321356 RP2O75695 350 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 SIX6O95475 246 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 GPANK1O95872 356 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 WNT11O96014 354 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 ITGB2P05107 769 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 ZNF35P13682 527 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 GTF2F2P13984 249 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 PRKACBP22694 351 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 PRSS3P35030 304 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 SLC6A8P48029 635 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 MAP2K6P52564 334 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 ROM1Q03395 351 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 RAB11BQ15907 218 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 C2orf76Q3KRA6 126 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 C9orf50Q5SZB4 431 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.86□□□□□ -1.15
CLK1-201ENST00000321356 DCAF12L2Q5VW00 463 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 LRRC69Q6ZNQ3 347 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 OVCH2Q7RTZ1 564 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 KRT77Q7Z794 578 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 PM20D2Q8IYS1 436 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 C7orf61Q8IZ16 206 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 FRMD1Q8N878 549 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 ZNF321PQ8N8H1 164 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 KNL1Q8NG31 2342 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 OR51S1Q8NGJ8 323 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 ATOH1Q92858 354 aaPredicted RBP7.86□□□□□ -1.15
CLK1-201ENST00000321356 SLC25A28Q96A46 364 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 FAM3DQ96BQ1 224 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 MMABQ96EY8 250 aaPredicted RBP7.86□□□□□ -1.15
CLK1-201ENST00000321356 LINC00052Q96N35 136 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 SLC46A1Q96NT5 459 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 MAP3K3Q99759 626 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 PPA2Q9H2U2 334 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 APMAPQ9HDC9 416 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 LANCL2Q9NS86 450 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 EPHA6Q9UF33 1036 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 TDRD6O60522 2096 aaKnown RBP7.86□□□□□ -1.15
CLK1-201ENST00000321356 ALPK2Q86TB3 2170 aa7.86□□□□□ -1.15
CLK1-201ENST00000321356 TRAV36DV7A0A075B6V5 113 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 TRAV18A0A075B6X5 111 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 IGLV1-36A0A0B4J1U3 117 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 FRG2CA6NGY1 282 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CHURC1-FNTBB4DL54 471 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 H0YIG0 161 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 SULT1C2O00338 296 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 AQP8O94778 261 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CD3DP04234 171 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 IGKV3-11P04433 115 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 RLN1P04808 185 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CCKBRP32239 447 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 PBX2P40425 430 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CAPZBP47756 277 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 FNTBP49356 437 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CCR5P51681 352 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ZNF117Q03924 483 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 C1orf61Q13536 156 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 UBXN2BQ14CS0 331 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 YOD1Q5VVQ6 348 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 STEAP1BQ6NZ63 245 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ALKAL2Q6UX46 152 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ZNF679Q8IYX0 411 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ZNF519Q8TB69 540 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 TSEN15Q8WW01 171 aaKnown RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 ASB17Q8WXJ9 295 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 C8orf44Q96CB5 159 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 CXorf58Q96LI9 332 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ELF4Q99607 663 aaPredicted RBP7.85□□□□□ -1.15
CLK1-201ENST00000321356 TMEM106CQ9BVX2 250 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 C1QTNF6Q9BXI9 259 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 RTN4RQ9BZR6 473 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 S1PR5Q9H228 398 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 ELOVL3Q9HB03 270 aa7.85□□□□□ -1.15
CLK1-201ENST00000321356 MYOZ1Q9NP98 299 aaPredicted RBP7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms