RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 CD3EP07766 207 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 CLDN15P56746 228 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 EIF5AP63241 154 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 DUSP2Q05923 314 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 HSD17B12Q53GQ0 312 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 C9orf135Q5VTT2 229 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 RPL22L1Q6P5R6 122 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 MOB3CQ70IA8 216 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 ARIH2OSQ8N7S6 290 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 ALG8Q9BVK2 526 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 FUNDC2Q9BWH2 189 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SEMA4CQ9C0C4 833 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 OR51B6Q9H340 312 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 HYAL3O43820 417 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SEC14L2O76054 403 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 RGS11O94810 467 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 GRPRP30550 384 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 LIMS1P48059 325 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 GRB2P62993 217 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 RPP30P78346 268 aaKnown RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 PLEKHN1Q494U1 663 aaPredicted RBP7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SYT14P1Q58G82 188 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 TMEM236Q5W0B7 351 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 LRRC17Q8N6Y2 441 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 OR4N2Q8NGD1 307 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 TXNIPQ9H3M7 391 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 EGLN3Q9H6Z9 239 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 MAN2C1Q9NTJ4 1040 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 SIGLEC7Q9Y286 467 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 KCNIP3Q9Y2W7 256 aa7.76□□□□□ -1.17
PDLIM5-201ENST00000317968 LOC102723996A0A087X1L8 192 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TSPAN2O60636 221 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 GCM2O75603 506 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 CCL4P13236 92 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF182P17025 639 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SRD5A2P31213 254 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF45Q02386 682 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SSX6Q7RTT6 188 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TPRA1Q86W33 373 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 C10orf111Q8N326 155 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SCCPDHQ8NBX0 429 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 DNAJA3Q96EY1 480 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 GNRHR2Q96P88 292 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SPSB2Q99619 263 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RTL8AQ9BWD3 113 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 HIF3AQ9Y2N7 669 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 UBL3O95164 117 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TDGF1P13385 188 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 DIO1P49895 249 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ERVK-25P63136 954 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TOMM34Q15785 309 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF74Q16587 644 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM219BQ5XKK7 198 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TMEM108Q6UXF1 575 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 KANSL1Q7Z3B3 1105 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 IQCF2Q8IXL9 164 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 IL20RAQ9UHF4 553 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 CLEC4AQ9UMR7 237 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 KDM4EB2RXH2 506 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF254O75437 659 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RECKO95980 971 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 CELP19835 753 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RGS6P49758 472 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 EFNA3P52797 238 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 LSM3P62310 102 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RBM39Q14498 530 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF718Q3SXZ3 478 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 CCDC58Q4VC31 144 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SYT14Q8NB59 555 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC22A4Q9H015 551 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 PPP1R14DQ9NXH3 145 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TRAPPC4Q9Y296 219 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TRAV27A0A087WT01 109 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 NPIPB9F8W1W9 429 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SNPHO15079 494 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 HTR3BO95264 441 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 GALP22466 123 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 AQP2P41181 271 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF136P52737 540 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 GNB2P62879 340 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RGS21Q2M5E4 152 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TIGD3Q6B0B8 471 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 NPSR1Q6W5P4 371 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 KCTD12Q96CX2 325 aaKnown RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 LMF1Q96S06 567 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 FSCN3Q9NQT6 498 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SLCO1B1Q9Y6L6 691 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RGS9O75916 674 aaPredicted RBP7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SCG5P05408 212 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 TNFRSF1AP19438 455 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 PYCR1P32322 319 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 UGT2B10P36537 528 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 ZNF117Q03924 483 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 PRSS53Q2L4Q9 553 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 FAM109AQ8N4B1 249 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 SLC37A3Q8NCC5 494 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 OR5D14Q8NGL3 314 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 DIRAS2Q96HU8 199 aa7.75□□□□□ -1.17
PDLIM5-201ENST00000317968 RASL10BQ96S79 203 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms