RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 PSMD9O00233 223 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 RPP14O95059 124 aaKnown RBP12.79□□□□□ -0.36
VRK3-201ENST00000316763 ZFPL1O95159 310 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 NUDT14O95848 222 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 UMODP07911 640 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 CD3GP09693 182 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 PRKCAP17252 672 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 SPINK2P20155 84 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 SRP9P49458 86 aaKnown RBP12.79□□□□□ -0.36
VRK3-201ENST00000316763 GZMKP49863 264 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 DGCR2P98153 550 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 DYRK1AQ13627 763 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 HSPB2Q16082 182 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 TMEM164Q5U3C3 297 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 TIGD4Q8IY51 512 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 ZNF433Q8N7K0 673 aaPredicted RBP12.79□□□□□ -0.36
VRK3-201ENST00000316763 GRPEL2Q8TAA5 225 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 TSSK2Q96PF2 358 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 TSPAN32Q96QS1 320 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 WDR76Q9H967 626 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 TCF7L1Q9HCS4 588 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 STMN3Q9NZ72 180 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 FOXJ2Q9P0K8 574 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 C19orf25Q9UFG5 118 aaPredicted RBP12.79□□□□□ -0.36
VRK3-201ENST00000316763 WASF3Q9UPY6 502 aa12.79□□□□□ -0.36
VRK3-201ENST00000316763 LOC102723996A0A087X1L8 192 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 ACOD1A6NK06 481 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 ALG1L2C9J202 215 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 XKRYO14609 159 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 PIN1P1O15428 100 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 TSPAN2O60636 221 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 MT-ATP6P00846 226 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 TCRBP04435 133 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 OR8G3PP0DMU2 310 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 BTCP35070 178 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 PNLIPRP2P54317 469 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 NANOS3P60323 173 aaKnown RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 CBFBQ13951 182 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 EFR3AQ14156 821 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 Q499Y3 187 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 MESTQ5EB52 335 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 PAPD4Q6PIY7 484 aaKnown RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 MAMDC2Q7Z304 686 aaPredicted RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 MARCH3Q86UD3 253 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 SIAH3Q8IW03 269 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 OR2Y1Q8NGV0 311 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 SMIM4Q8WVI0 70 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 SCNM1Q9BWG6 230 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 CACNG6Q9BXT2 260 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 GON7Q9BXV9 100 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 NRSN2Q9GZP1 204 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 MRM2Q9UI43 246 aaKnown RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 IKZF2Q9UKS7 526 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 ZNF346Q9UL40 294 aaKnown RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 PADI1Q9ULC6 663 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 BOLA1Q9Y3E2 137 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 A0A0A6YYJ9 748 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 BGLAPP02818 100 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 CD63P08962 238 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 CALCBP10092 127 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 STOMP27105 288 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 EGR3Q06889 387 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 TNK1Q13470 666 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 RNASE12Q5GAN4 147 aaKnown RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 HES5Q5TA89 166 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 BCL2L15Q5TBC7 163 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 EEF1A1P5Q5VTE0 462 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 FAM69BQ5VUD6 431 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 LIPNQ5VXI9 398 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 C6orf15Q6UXA7 325 aaPredicted RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 TIPARPQ7Z3E1 657 aaKnown RBP12.78□□□□□ -0.36
VRK3-201ENST00000316763 CMTM4Q8IZR5 234 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 OR6N2Q8NGY6 317 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 LILRB4Q8NHJ6 448 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 OMA1Q96E52 524 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 INTS14Q96SY0 518 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 COMMD4Q9H0A8 199 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 SLC25A18Q9H1K4 315 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 NUDT15Q9NV35 164 aa12.78□□□□□ -0.36
VRK3-201ENST00000316763 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 C7orf66A4D0T2 115 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 TVP23AA6NH52 213 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 PRR32B1ATL7 298 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 SULT1B1O43704 296 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 UPK3AO75631 287 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 RAB40ALP0C0E4 278 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 POLR2HP52434 150 aaKnown RBP12.77□□□□□ -0.37
VRK3-201ENST00000316763 RAG2P55895 527 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 RNF4P78317 190 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 SNTB2Q13425 540 aaKnown RBP12.77□□□□□ -0.37
VRK3-201ENST00000316763 OR6V1Q8N148 313 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 RAB40AQ8WXH6 277 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 THRSPQ92748 146 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 C8orf44Q96CB5 159 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 OR2M2Q96R28 347 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 B3GNT4Q9C0J1 378 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 ACTR6Q9GZN1 396 aa12.77□□□□□ -0.37
VRK3-201ENST00000316763 ZNF275Q9NSD4 429 aaPredicted RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms