RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 MAP6Q96JE9 813 aa6.25□□□□□ -1.41
LYSMD3-201ENST00000315948 ATF6BQ99941 703 aa6.25□□□□□ -1.41
LYSMD3-201ENST00000315948 MMP27Q9H306 513 aa6.25□□□□□ -1.41
LYSMD3-201ENST00000315948 SEC61A2Q9H9S3 476 aa6.25□□□□□ -1.41
LYSMD3-201ENST00000315948 HMG20AQ9NP66 347 aa6.25□□□□□ -1.41
LYSMD3-201ENST00000315948 NOX4Q9NPH5 578 aa6.25□□□□□ -1.41
LYSMD3-201ENST00000315948 TRDV1A0A1B0GX56 115 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 NPIPA5E9PKD4 350 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SULT2B1O00204 365 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 PLPP2O43688 288 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 NEURL1O76050 574 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TXNDC12O95881 172 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SNRPBP14678 240 aaKnown RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ALOX5APP20292 161 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 APOBEC1P41238 236 aaKnown RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 PSPHP78330 225 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 PMP22Q01453 160 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 GGTLC2Q14390 218 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TIMM50Q3ZCQ8 353 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TIGD3Q6B0B8 471 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TMEM225Q6GV28 225 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 RNF144BQ7Z419 303 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 CCDC190Q86UF4 302 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 CDC20BQ86Y33 519 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 M1APQ8TC57 530 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 NEDD4LQ96PU5 975 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 GAL3ST1Q99999 423 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ELOVL3Q9HB03 270 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 CHST11Q9NPF2 352 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 MRPL39Q9NYK5 338 aaKnown RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 LRFN1Q9P244 771 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 MYEF2Q9P2K5 600 aaKnown RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 NPIPA1Q9UND3 350 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 RASD1Q9Y272 281 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TRAV8-7A0A075B6U6 113 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 A0A0G2JK05 382 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 HLA-DPB1P04440 258 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 PATE4P0C8F1 98 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SSPNQ14714 243 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ZNF846Q147U1 533 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 C3orf33Q6P1S2 294 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 NHLRC1Q6VVB1 395 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 PIP4P1Q86T03 277 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 LYSMD2Q8IV50 215 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ZNF433Q8N7K0 673 aaPredicted RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 DDIT4LQ96D03 193 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 INTS14Q96SY0 518 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ANGPTL4Q9BY76 406 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 CCDC59Q9P031 241 aaKnown RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 DKKL1Q9UK85 242 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 PCDHGB6Q9Y5F9 930 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 LOC110117498-PIK3R3F6TDL0 507 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TP53I11O14683 189 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 TRAF3IP2O43734 574 aaPredicted RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 RGS9O75916 674 aaPredicted RBP6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SOX6P35712 828 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 KIR3DL2P43630 455 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SELENOPP49908 381 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 HES5Q5TA89 166 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ASPHD2Q6ICH7 369 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 OPN5Q6U736 354 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 DCXRQ7Z4W1 244 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 NAA40Q86UY6 237 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SERPINA12Q8IW75 414 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 OR8H2Q8N162 312 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 OR2T4Q8NH00 348 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 OR14L1PQ8NHC6 308 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 SMIM19Q96E16 107 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 DIRAS2Q96HU8 199 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 MRGPRX4Q96LA9 322 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 ABHD6Q9BV23 337 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 CENPMQ9NSP4 180 aa6.24□□□□□ -1.41
LYSMD3-201ENST00000315948 A0A1W2PPL8 197 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 E9PLN8 166 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 LANCL1O43813 399 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 SC5DO75845 299 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 RENP00797 406 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 MT-ATP6P00846 226 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 EIF4EP06730 217 aaKnown RBP6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 NAGAP17050 411 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 ATF1P18846 271 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 ELK1P19419 428 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 S100A5P33763 92 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 CLDN17P56750 224 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 CSRP2Q16527 193 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 TMEM44Q2T9K0 475 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 WDR38Q5JTN6 314 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 LRFN4Q6PJG9 635 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 SLC16A9Q7RTY1 509 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 SLC26A10Q8NG04 563 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 MFSD8Q8NHS3 518 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 ADAMTS17Q8TE56 1095 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 KCNK17Q96T54 332 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 BCL7BQ9BQE9 202 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 LRFN3Q9BTN0 628 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 JAM3Q9BX67 310 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 ASH1LQ9NR48 2969 aaKnown RBP6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 BOLA2-SMG1P6H3BVE0 249 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 RER1O15258 196 aa6.23□□□□□ -1.41
LYSMD3-201ENST00000315948 MAS1P04201 325 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms