RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 OR52W1Q6IF63 320 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 FAM71CQ8NEG0 241 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 SNAPC3Q92966 411 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 SARGQ9BW04 601 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 BARHL1Q9BZE3 327 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 OCIAD1Q9NX40 245 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 TSPAN11A1L157 253 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 LGALS8O00214 317 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ETHE1O95571 254 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ABHD11Q8NFV4 315 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 CT55Q8WUE5 264 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 MUL1Q969V5 352 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ANKRD19PQ9H560 264 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 RABL2AQ9UBK7 228 aaPredicted RBP12.33□□□□□ -0.44
RFFL-201ENST00000315249 RABL2BQ9UNT1 228 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 FRG2CA6NGY1 282 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 LGI1O95970 557 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 IFNA4P05014 189 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 AKAIN1P0CW23 69 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 NR4A2P43354 598 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ZNF91Q05481 1191 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 AGAP6Q5VW22 663 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 RPL22L1Q6P5R6 122 aaKnown RBP12.33□□□□□ -0.44
RFFL-201ENST00000315249 SPRED1Q7Z699 444 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ADGRF3Q8IZF5 1079 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 FBXL14Q8N1E6 418 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 TMEM106AQ96A25 262 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 NIPAL2Q9H841 368 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 NLKQ9UBE8 527 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 OR52A1Q9UKL2 312 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 TRIM64CA6NLI5 447 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ATXN7O15265 892 aaPredicted RBP12.33□□□□□ -0.44
RFFL-201ENST00000315249 OR8U9P0C7N5 309 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 UBCP0CG48 685 aaKnown RBP12.33□□□□□ -0.44
RFFL-201ENST00000315249 CCL4P13236 92 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 TMEM11P17152 192 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 DAPP51397 102 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 GRPEL2Q8TAA5 225 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 TAAR8Q969N4 342 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 ASH2LQ9UBL3 628 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 TRPM7Q96QT4 1865 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 DLL1O00548 723 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 SELEP16581 610 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 EMDP50402 254 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 DSCR4P56555 118 aaPredicted RBP12.33□□□□□ -0.44
RFFL-201ENST00000315249 SMN1Q16637 294 aaKnown RBP12.33□□□□□ -0.44
RFFL-201ENST00000315249 PLK5Q496M5 336 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 GPR155Q7Z3F1 870 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 FAM185AQ8N0U4 392 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 GPR119Q8TDV5 335 aa12.33□□□□□ -0.44
RFFL-201ENST00000315249 PNLIPRP2P54317 469 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 FGL1Q08830 312 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 BTLAQ7Z6A9 289 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 B3GNT8Q7Z7M8 397 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 RAB3CQ96E17 227 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 NOX4Q9NPH5 578 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 WNK3Q9BYP7 1800 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ZDBF2Q9HCK1 2354 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 TCRBV3S1A0A5B6 114 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ADAM23O75077 832 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 GAAP10253 952 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 CHRNB1P11230 501 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ABCD3P28288 659 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 GPBAR1Q8TDU6 330 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 MED29Q9NX70 200 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ETAA1Q9NY74 926 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ZNF346Q9UL40 294 aaKnown RBP12.32□□□□□ -0.44
RFFL-201ENST00000315249 TRBV5-4A0A0C4DH59 114 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 PRKACAP17612 351 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ADH6P28332 368 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 TRIM23P36406 574 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 SLC43A2Q8N370 569 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 SEMA6DQ8NFY4 1073 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 MRI1Q9BV20 369 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 UPK1AO00322 258 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 THBS1P07996 1170 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 PAN3Q58A45 887 aaKnown RBP12.32□□□□□ -0.44
RFFL-201ENST00000315249 RTL6Q6ICC9 239 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 SPINK14Q6IE38 97 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 GPR173Q9NS66 373 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 GABRPO00591 440 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 T-ENOLP0DO92 83 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ACER2Q5QJU3 275 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 OR2A2Q6IF42 318 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 NKX3-1Q99801 234 aaPredicted RBP12.32□□□□□ -0.44
RFFL-201ENST00000315249 RTL8AQ9BWD3 113 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 LHX9Q9NQ69 397 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 TIMM10BQ9Y5J6 103 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 DNAJB6O75190 326 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 RPA2P15927 270 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 ZNF93P35789 620 aaPredicted RBP12.32□□□□□ -0.44
RFFL-201ENST00000315249 DND1Q8IYX4 353 aaKnown RBP12.32□□□□□ -0.44
RFFL-201ENST00000315249 GALNT16Q8N428 558 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 GHSRQ92847 366 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 NOX3Q9HBY0 568 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 NDUFAF4Q9P032 175 aa12.32□□□□□ -0.44
RFFL-201ENST00000315249 TNS1Q9HBL0 1735 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms