RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 ZNF728P0DKX0 622 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 DPP4P27487 766 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ABHD17BQ5VST6 288 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 NPSR1Q6W5P4 371 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 S100A7AQ86SG5 101 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 KLF15Q9UIH9 416 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 SLC5A10A0PJK1 596 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 BTBD17A6NE02 478 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 DFFBO76075 338 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ZNF44P15621 663 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 CEBPBP17676 345 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 PLPP7Q8NBV4 271 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 IKZF5Q9H5V7 419 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ZNF385DQ9H6B1 395 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 PDFQ9HBH1 243 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 TGM1P22735 817 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 MSX1P28360 303 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 SYS1Q8N2H4 156 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ZNF629Q9UEG4 869 aaPredicted RBP12.12□□□□□ -0.47
SNED1-201ENST00000310397 PCDHGA1Q9Y5H4 931 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 OTOL1A6NHN0 477 aaPredicted RBP12.12□□□□□ -0.47
SNED1-201ENST00000310397 TIMP1P01033 207 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 OMGP23515 440 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 EEF1A1P68104 462 aaKnown RBP12.12□□□□□ -0.47
SNED1-201ENST00000310397 DUSP8Q13202 625 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 EXOSC2Q13868 293 aaKnown RBP12.12□□□□□ -0.47
SNED1-201ENST00000310397 BRICD5Q6PL45 260 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 LCORQ96JN0 433 aaPredicted RBP12.12□□□□□ -0.47
SNED1-201ENST00000310397 RNF170Q96K19 258 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 PMP2P02689 132 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 NTHL1P78549 312 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 CTBSQ01459 385 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 EGR3Q06889 387 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 ZNF852Q6ZMS4 543 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 CDH26Q8IXH8 852 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 OR1S2Q8NGQ3 325 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 FOXN4Q96NZ1 517 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 GAREM1Q9H706 876 aa12.12□□□□□ -0.47
SNED1-201ENST00000310397 TRAV1-2A0A0B4J238 106 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 M0QYG6 137 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 FCGR2AP12318 317 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 FOLR1P15328 257 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 HOXC8P31273 242 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 FAM111BQ6SJ93 734 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 DVL3Q92997 716 aaPredicted RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 NECAP2Q9NVZ3 263 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 CHD5Q8TDI0 1954 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 HOXC11O43248 304 aaPredicted RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 SLC36A2Q495M3 483 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 OPN5Q6U736 354 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 PIGCQ92535 297 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 TXN2Q99757 166 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 IFITM5A6NNB3 132 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 HPNP05981 417 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 PSMB6P28072 239 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 GRB2P62993 217 aaKnown RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 XAF1Q6GPH4 301 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 ESPNLQ6ZVH7 1005 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 NLRC3Q7RTR2 1065 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 C19orf47Q8N9M1 422 aaKnown RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 CPNE4Q96A23 557 aaPredicted RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 BCL2L10Q9HD36 194 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 HINT3Q9NQE9 182 aaKnown RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 TAS2R5Q9NYW4 299 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 MDC1Q14676 2089 aaKnown RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 UTS2O95399 124 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 TMEM201Q5SNT2 666 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 MRPL43Q8N983 215 aaKnown RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 ABHD6Q9BV23 337 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 FTSJ1Q9UET6 329 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 PTPRFP10586 1907 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 TNFSF12O43508 249 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 SELENOFO60613 162 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 CATR1Q13166 79 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 ERVMER34-1Q9H9K5 563 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 CSAG2Q9Y5P2 127 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 PAPPAQ13219 1627 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 TPOP07202 933 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 SRYQ05066 204 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 UCN3Q969E3 161 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 ZMAT3Q9HA38 289 aaKnown RBP12.11□□□□□ -0.47
SNED1-201ENST00000310397 TNFRSF12AQ9NP84 129 aa12.11□□□□□ -0.47
SNED1-201ENST00000310397 RBBP6Q7Z6E9 1792 aaKnown RBP12.1□□□□□ -0.47
SNED1-201ENST00000310397 H7C1Q1 480 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 SLC35A1P78382 337 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 MED25Q71SY5 747 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 CPT1CQ8TCG5 803 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 A0A087WZY1 265 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 SOCS7O14512 581 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 FKBP2P26885 142 aaKnown RBP12.1□□□□□ -0.47
SNED1-201ENST00000310397 TNFRSF4P43489 277 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 DGCR2P98153 550 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 ZNF511Q8NB15 262 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 KLHDC9Q8NEP7 349 aa12.1□□□□□ -0.47
SNED1-201ENST00000310397 LTB4R2Q9NPC1 389 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms