RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 SF3B6Q9Y3B4 125 aaKnown RBP9.75□□□□□ -0.85
MUC4-201ENST00000308466 SHISA3A0PJX4 238 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 ZNF749O43361 778 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 PLPP2O43688 288 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 ICOSLGO75144 302 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 GPANK1O95872 356 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 IGKV1D-16P01601 117 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 CD27P26842 260 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 SLC6A8P48029 635 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 HSD11B2P80365 405 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 ZNF85Q03923 595 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 TLE3Q04726 772 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 METTL11BQ5VVY1 283 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 LRRC69Q6ZNQ3 347 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 NLRC3Q7RTR2 1065 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 CMTM4Q8IZR5 234 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 OR4K17Q8NGC6 315 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 C3orf49Q96BT1 292 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 ZMAT3Q9HA38 289 aaKnown RBP9.75□□□□□ -0.85
MUC4-201ENST00000308466 MIOXQ9UGB7 285 aa9.75□□□□□ -0.85
MUC4-201ENST00000308466 ZNF726A6NNF4 738 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 HSD11B1P28845 292 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 SFTPDP35247 375 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 PCP4P48539 62 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 VEGFCP49767 419 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 CCR5P51681 352 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 LTBQ06643 244 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 TDGQ13569 410 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 ALKBH1Q13686 389 aaKnown RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 ATXN7L3Q14CW9 347 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 Q499Y3 187 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 LRRC37A5PQ49AS3 106 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 YOD1Q5VVQ6 348 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 RFLNBQ8N5W9 214 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 OR52I2Q8NH67 350 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 FAM174AQ8TBP5 190 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 UPRTQ96BW1 309 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 MOGAT1Q96PD6 335 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 LPAR4Q99677 370 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 CMSS1Q9BQ75 279 aaKnown RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 ZNF436Q9C0F3 470 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 METTL17Q9H7H0 456 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 GLS2Q9UI32 602 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 FLVCR2Q9UPI3 526 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 CAMK2AQ9UQM7 478 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 PLXND1Q9Y4D7 1925 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 WRBO00258 174 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 ARPC5O15511 151 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 SUSD5O60279 629 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 CREBL2O60519 120 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 PPICP45877 212 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 ZNF41P51814 821 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 SGCAQ16586 387 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 C19orf48Q6RUI8 117 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 BAIAP2L2Q6UXY1 529 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 LURAP1LQ8IV03 231 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 CMIPQ8IY22 773 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 ZNF417Q8TAU3 575 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 KTI12Q96EK9 354 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 CPNE2Q96FN4 548 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 RBM14Q96PK6 669 aaKnown RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 NOX3Q9HBY0 568 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 PPP4R1LQ9P1A2 415 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 A0A0A6YYJ9 748 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 BET1O15155 118 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 LANCL1O43813 399 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 IGHV4-34P06331 123 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 TRAPPC2P0DI81 140 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 TRAPPC2BP0DI82 140 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 ZNF14P17017 642 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 VAMP1P23763 118 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 CDKN2AP42771 156 aaKnown RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 SLC6A9P48067 706 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 SPOCK1Q08629 439 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 COL28A1Q2UY09 1125 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 GPR139Q6DWJ6 353 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 C16orf47Q6ZP98 133 aaPredicted RBP9.74□□□□□ -0.85
MUC4-201ENST00000308466 TRILQ7L0X0 811 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 PDZD9Q8IXQ8 264 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 C15orf40Q8WUR7 153 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 VSTM2LQ96N03 204 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 DEFB126Q9BYW3 111 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 TREM1Q9NP99 234 aa9.74□□□□□ -0.85
MUC4-201ENST00000308466 SDK2Q58EX2 2172 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 SNRNP200O75643 2136 aaKnown RBP9.73□□□□□ -0.85
MUC4-201ENST00000308466 TMED7-TICAM2A0A0A6YYA0 188 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 VSTM2BA6NLU5 285 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 HTR3BO95264 441 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 TFP02787 698 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 PSMB1P20618 241 aaKnown RBP9.73□□□□□ -0.85
MUC4-201ENST00000308466 HLA-DMAP28067 261 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 PRSS3P35030 304 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 KCNJ3P48549 501 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 CLDN20P56880 219 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 S100A12P80511 92 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 POU3F1Q03052 451 aaPredicted RBP9.73□□□□□ -0.85
MUC4-201ENST00000308466 GLO1Q04760 184 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 CBFBQ13951 182 aa9.73□□□□□ -0.85
MUC4-201ENST00000308466 CD226Q15762 336 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms