RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 ZNF420Q8TAQ5 688 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 GATAD2BQ8WXI9 593 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 DTNBP1Q96EV8 351 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF845Q96IR2 970 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 FOXN4Q96NZ1 517 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TTTY10Q9BZA0 68 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TSPAN10Q9H1Z9 355 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RERGLQ9H628 205 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZDHHC11Q9H8X9 412 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ISG20L2Q9H9L3 353 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 QPCTLQ9NXS2 382 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 DKK4Q9UBT3 224 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 B9D1Q9UPM9 204 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 MOKQ9UQ07 419 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RASD1Q9Y272 281 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 FKBP7Q9Y680 259 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 MTORP42345 2549 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RP1L1Q8IWN7 2480 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TRAV17A0A0B4J275 112 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 DAPL1A0PJW8 107 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SLC35F4A4IF30 521 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 PRR32B1ATL7 298 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 LINC01387J3KSC0 135 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 K7EM74 188 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF701M0R085 212 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 LRRTM2O43300 516 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 DNPH1O43598 174 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SLC16A7O60669 478 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 WISP2O76076 250 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 GABARAPO95166 117 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SCG5P05408 212 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 PGA4P0DJD7 388 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 PGA3P0DJD8 388 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF708P17019 499 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF43P17038 809 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TGFBR1P36897 503 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 EIF1AXP47813 144 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RGS6P49758 472 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 TMBIM6P55061 237 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CARD18P57730 90 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 LSAMPQ13449 338 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 GALEQ14376 348 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SLC17A1Q14916 467 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 POU4F3Q15319 338 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CTF1Q16619 201 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 FAM205BPQ63HN1 556 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF322Q6U7Q0 402 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ATCAYQ86WG3 371 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 KLHL36Q8N4N3 616 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 OR52N1Q8NH53 320 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 SPRYD4Q8WW59 207 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ROBO4Q8WZ75 1007 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 RPL3LQ92901 407 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 DCBLD2Q96PD2 775 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ARHGAP9Q9BRR9 750 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 NAA11Q9BSU3 229 aaPredicted RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ALG8Q9BVK2 526 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 MRPL13Q9BYD1 178 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 DEFB127Q9H1M4 99 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 PRORYQ9H606 182 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CCDC86Q9H6F5 360 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 WDR76Q9H967 626 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 MARCH7Q9H992 704 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ACKR4Q9NPB9 350 aa6.2□□□□□ -1.42
PTCD2-201ENST00000308077 CHCHD3Q9NX63 227 aaKnown RBP6.2□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF407Q9C0G0 2248 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 A0A1W2PPW3 197 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 TRIM64BA6NI03 449 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 ACOT7O00154 380 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 MAGEB4O15481 346 aaPredicted RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 GADD45AP24522 165 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 RPS27P42677 84 aaKnown RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 CLDN17P56750 224 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 SRYQ05066 204 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 MLLT11Q13015 90 aaPredicted RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 CAMK2DQ13557 499 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 C1DQ13901 141 aaKnown RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 SLC10A1Q14973 349 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 SPCS2Q15005 226 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 CARD17Q5XLA6 110 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 ABLIM2Q6H8Q1 611 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 PLXDC2Q6UX71 529 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 IGFL3Q6UXB1 125 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 CREB3L2Q70SY1 520 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 SLC16A9Q7RTY1 509 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 P2RY8Q86VZ1 359 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 ERI1Q8IV48 349 aaKnown RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 ZIC4Q8N9L1 334 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 NOXO1Q8NFA2 376 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 OR9K2Q8NGE7 335 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 OR6X1Q8NH79 312 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 NEIL3Q8TAT5 605 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 ABTB1Q969K4 478 aaPredicted RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 ZNF385AQ96PM9 386 aaKnown RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 DCUN1D5Q9BTE7 237 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 RACGAP1Q9H0H5 632 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 INPP5EQ9NRR6 644 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 MRPL22Q9NWU5 206 aaKnown RBP6.19□□□□□ -1.42
PTCD2-201ENST00000308077 PTTG2Q9NZH5 202 aa6.19□□□□□ -1.42
PTCD2-201ENST00000308077 SPRR3Q9UBC9 169 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms