RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 SIRPAP78324 504 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 MXD1Q05195 221 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 SLC3A1Q07837 685 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 INSL4Q14641 139 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 LRRC69Q6ZNQ3 347 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 PLEKHG7Q6ZR37 379 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 KCTD20Q7Z5Y7 419 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 BTLAQ7Z6A9 289 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 WDFY1Q8IWB7 410 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 MS4A15Q8N5U1 240 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 OR6N2Q8NGY6 317 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 NEIL3Q8TAT5 605 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 HAVCR2Q8TDQ0 301 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 RNF166Q96A37 237 aaPredicted RBP10.63□□□□□ -0.71
TRIM40-205ENST00000307859 DTNBP1Q96EV8 351 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 OCEL1Q9H607 264 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 ANKRD10Q9NXR5 420 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 TMEM14AQ9Y6G1 99 aa10.63□□□□□ -0.71
TRIM40-205ENST00000307859 SHISA3A0PJX4 238 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 AQP7P3A6NL99 342 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 HSPB2A8KAH6 182 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 PHYHO14832 338 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TRAF3IP2O43734 574 aaPredicted RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 SULT1C4O75897 302 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 PSKH1P11801 424 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 CD40LGP29965 261 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 SFTPDP35247 375 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 PTGS2P35354 604 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MTNR1BP49286 362 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 GDI2P50395 445 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 B3GALT5-AS1P59052 145 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 SLC35A1P78382 337 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 EGR3Q06889 387 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MRPL28Q13084 256 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 HNRNPA0Q13151 305 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 AIMP2Q13155 320 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 HSPB2Q16082 182 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TMEM176BQ3YBM2 270 aaPredicted RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 RAET1LQ5VY80 246 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 C16orf87Q6PH81 154 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 DNM1P34Q6PK57 102 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TMPPEQ6ZT21 453 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 IL22RA1Q8N6P7 574 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 OTOSQ8NHW6 89 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ABHD4Q8TB40 342 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 GHSRQ92847 366 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TXNDC15Q96J42 360 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 JSRP1Q96MG2 331 aaPredicted RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 OXGR1Q96P68 337 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 DCBLD2Q96PD2 775 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 KCNS3Q9BQ31 491 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MRPL22Q9NWU5 206 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 STMN3Q9NZ72 180 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 PLEKHB1Q9UF11 243 aaPredicted RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MRM2Q9UI43 246 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TEKT2Q9UIF3 430 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 CENPBD1B2RD01 187 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ZNF814B7Z6K7 855 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ERVH48-1M5A8F1 160 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 DVL2O14641 736 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 CASKO14936 926 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 GPRIN2O60269 458 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 GPANK1O95872 356 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 OPN1LWP04000 364 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TACSTD2P09758 323 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 EIF2S3P41091 472 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 H3F3AP84243 136 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ZNF45Q02386 682 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ETFDHQ16134 617 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ABHD17BQ5VST6 288 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 IGF2-ASQ6U949 168 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 PCSK4Q6UW60 755 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 DPY19L4Q7Z388 723 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 CCDC190Q86UF4 302 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 UEVLDQ8IX04 471 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 FER1L6-AS2Q96M78 137 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ADAD1Q96M93 576 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 WDFY2Q96P53 400 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MRPL13Q9BYD1 178 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 TPK1Q9H3S4 243 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 ASCL3Q9NQ33 180 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 DEPPQ9NTK1 212 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MED29Q9NX70 200 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 LAMP5Q9UJQ1 280 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 MRPS18CQ9Y3D5 142 aaKnown RBP10.62□□□□□ -0.71
TRIM40-205ENST00000307859 COL6A6A6NMZ7 2263 aa10.62□□□□□ -0.71
TRIM40-205ENST00000307859 CFAP46Q8IYW2 2715 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 TRBV2A0A0J9YWF9 115 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 A0A1B0GVG6 124 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 SLC35F4A4IF30 521 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 SULT2B1O00204 365 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 CTDSP2O14595 271 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 UPK3AO75631 287 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 NEURL1O76050 574 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 SERPINA3P01011 423 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 KRT8P05787 483 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 OR8G3PP0DMU2 310 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 CNR1P21554 472 aa10.61□□□□□ -0.71
TRIM40-205ENST00000307859 EDNRAP25101 427 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms