RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 NR0B1P51843 470 aaKnown RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 TMEM69Q5SWH9 247 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 LANCL3Q6ZV70 420 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 ANKRD37Q7Z713 158 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 ZNF227Q86WZ6 799 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 SERPINA12Q8IW75 414 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 ZNF431Q8TF32 576 aaPredicted RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 S100A16Q96FQ6 103 aaKnown RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 PHF7Q9BWX1 381 aaPredicted RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 KCNK15Q9H427 330 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 A0A1B0GVI7 797 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 PRAF2O60831 178 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 MPC2O95563 127 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 PNPP00491 289 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 HPGDP15428 266 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 PGCP20142 388 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 CXCR1P25024 350 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 PTGDSP41222 190 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 STARD6P59095 220 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 ACKR1Q16570 336 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 COL28A1Q2UY09 1125 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 C1orf140Q5VVS0 124 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 ANKRD16Q6P6B7 361 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 NHLRC1Q6VVB1 395 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 MAMDC2Q7Z304 686 aaPredicted RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 KANSL1Q7Z3B3 1105 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 KMT5CQ86Y97 462 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 GPR148Q8TDV2 347 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 CLIP3Q96DZ5 547 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 GAL3ST4Q96RP7 486 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 NDEL1Q9GZM8 345 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 SLC22A11Q9NSA0 550 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 CTSFQ9UBX1 484 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 ING4Q9UNL4 249 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 PPIEQ9UNP9 301 aaKnown RBP6.49□□□□□ -1.37
RGPD3-201ENST00000304514 FKBP7Q9Y680 259 aa6.49□□□□□ -1.37
RGPD3-201ENST00000304514 SPEGQ15772 3267 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 IGLV3-12A0A075B6K2 115 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LOC101059948A0A1B0GTJ6 334 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LOC390937A0A1W2PQ73 354 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 OR2M5A3KFT3 312 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LINC00862A6NCI5 91 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 HCRTR2O43614 444 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 MAS1P04201 325 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 PTHLHP12272 177 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ITPKBP27987 946 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 CENPAP49450 140 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 VEGFCP49767 419 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 TDGQ13569 410 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ANGPT1Q15389 498 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LINC00303Q3SY05 128 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 FAAP20Q6NZ36 180 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 MAMSTRQ6ZN01 415 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 DPY19L4Q7Z388 723 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ZNF417Q8TAU3 575 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 NXPE2Q96DL1 559 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 SORCS2Q96PQ0 1159 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 TCF7L1Q9HCS4 588 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 SLC17A5Q9NRA2 495 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 AKAP7Q9P0M2 348 aaPredicted RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 SCP2D1Q9UJQ7 156 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LAMA1P25391 3075 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LDLRAD4O15165 306 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 NDUFB6O95139 128 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ITGA5P08648 1049 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 DCTDP32321 178 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 RPS27P42677 84 aaKnown RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 HNRNPKP61978 463 aaKnown RBP eCLIP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 SNTB2Q13425 540 aaKnown RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ETFDHQ16134 617 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 SFRP4Q6FHJ7 346 aaPredicted RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 COMMD4Q9H0A8 199 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 LRP12Q9Y561 859 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 KHDRBS3O75525 346 aaKnown RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 VSIG10L2P0DP72 767 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 HLA-DOBP13765 273 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 BCKDHBP21953 392 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 RNF4P78317 190 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 MEP1BQ16820 701 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ZNF574Q6ZN55 896 aaPredicted RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 GRINAQ7Z429 371 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 GLB1L2Q8IW92 636 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 OR4D10Q8NGI6 311 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ANGPTL6Q8NI99 470 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 OR10A4Q9H209 315 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 A0A1W2PNV4 684 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 A8MVM7 634 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 DUX1O43812 170 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ZNF354AO60765 605 aaPredicted RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 AQP8O94778 261 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ONECUT2O95948 504 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 PLGP00747 810 aaPredicted RBP6.48□□□□□ -1.37
RGPD3-201ENST00000304514 HIST1H2ABP04908 130 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 ISG15P05161 165 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 GP1BBP13224 206 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 GLB1P16278 677 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 CTLA4P16410 223 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 SLC26A5P58743 744 aa6.48□□□□□ -1.37
RGPD3-201ENST00000304514 AP3S2P59780 193 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms