RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 LOC110117498-PIK3R3F6TDL0 507 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 OGG1O15527 345 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 ARL6IP5O75915 188 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 IGHG1P01857 330 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 CD40LGP29965 261 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 LIPNQ5VXI9 398 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF544Q6NX49 715 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 OTOSQ8NHW6 89 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 POLR1DQ9Y2S0 133 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 CPAMD8Q8IZJ3 1885 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A0G2JMM0 328 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 IQCMA0A1B0GVH7 501 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A1W2PPB8 328 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A1W2PPK0 400 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A1W2PRS3 328 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 NPIPB13A6NJU9 1138 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 A6NL46 340 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 KIR3DP1A8MWS1 328 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 NPIPB4C9JG80 1138 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 EIF1BO60739 113 aaKnown RBP12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 NCR1O76036 304 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF17P17021 662 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 TGM1P22735 817 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 MRPL28Q13084 256 aaKnown RBP12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 EIF2B1Q14232 305 aaKnown RBP12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 TGIF1Q15583 401 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 UBQLNLQ8IYU4 475 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 SLC7A5P1Q8MH63 180 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 ASB17Q8WXJ9 295 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 PSMF1Q92530 271 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 OCEL1Q9H607 264 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 DAPK2Q9UIK4 370 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 B3GNT3Q9Y2A9 372 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 CFAP54Q96N23 3096 aa12.99□□□□□ -0.33
SHCBP1-201ENST00000303383 NPIPA2E9PIF3 369 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 NPIPA3F8WFD2 350 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 GPRIN2O60269 458 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 ZIC3O60481 467 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 ALOX5APP20292 161 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 CD96P40200 585 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 MTNR1BP49286 362 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 RAC1P63000 192 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 EGR3Q06889 387 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 MEP1BQ16820 701 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 COMMD4Q9H0A8 199 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 B4GALT7Q9UBV7 327 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 FREM3P0C091 2139 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 IGLV1-36A0A0B4J1U3 117 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 SULT1C4O75897 302 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 PMS2P2O95744 297 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 CNR1P21554 472 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 TNFSF8P32971 234 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 IDNKQ5T6J7 187 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 PARP16Q8N5Y8 322 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF676Q8N7Q3 588 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 DIRAS2Q96HU8 199 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 SEC61A2Q9H9S3 476 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 KLHL13Q9P2N7 655 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 A0A1W2PPL8 197 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 TBX1O43435 398 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF12P17014 697 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 GUCA1AP43080 201 aaPredicted RBP12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 NOVA1P51513 510 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 FAM27D1Q5T7N8 215 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 LRRC69Q6ZNQ3 347 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 SNX29P2Q8IUI4 249 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 FNDC8Q8TC99 324 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 KCNK17Q96T54 332 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 ZFP64Q9NPA5 681 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 MRM2Q9UI43 246 aaKnown RBP12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 RASD1Q9Y272 281 aa12.98□□□□□ -0.33
SHCBP1-201ENST00000303383 AQP7P3A6NL99 342 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 EIF1AYO14602 144 aaKnown RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 TERTO14746 1132 aaKnown RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 TNFSF11O14788 317 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ZMAT1Q5H9K5 638 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 LRRN1Q6UXK5 716 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 LAX1Q8IWV1 398 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 SLC25A44Q96H78 314 aaPredicted RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 LRFN3Q9BTN0 628 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ELOVL3Q9HB03 270 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ABCB9Q9NP78 766 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF281Q9Y2X9 895 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 PTPRZ1P23471 2315 aaPredicted RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ZFHX2Q9C0A1 2572 aaPredicted RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ARGFXA6NJG6 315 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ZNF879B4DU55 563 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 DVL2O14641 736 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 CD97P48960 835 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 CLDN17P56750 224 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ALKBH1Q13686 389 aaKnown RBP12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 OR1C1Q15619 314 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 ADAMTS17Q8TE56 1095 aa12.97□□□□□ -0.33
SHCBP1-201ENST00000303383 KCNE4Q8WWG9 221 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms