RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 KIRREL2Q6UWL6 708 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ETV3LQ6ZN32 361 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 FAM220AQ7Z4H9 259 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ELP5Q8TE02 316 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 SLC25A21Q9BQT8 299 aaPredicted RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 EDEM2Q9BV94 578 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 SELENOIQ9C0D9 397 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 RNF122Q9H9V4 155 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 C19orf53Q9UNZ5 99 aaPredicted RBP9.87□□□□□ -0.83
ZNF558-201ENST00000301475 ARID1AO14497 2285 aa9.87□□□□□ -0.83
ZNF558-201ENST00000301475 PRICKLE3O43900 615 aaPredicted RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 SRPX2O60687 465 aaPredicted RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 CD74P04233 296 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 CSN2P05814 226 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF28P17035 718 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 PRKXP51817 358 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 RBM39Q14498 530 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 SCGB2B2Q4G0G5 96 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ASPHD2Q6ICH7 369 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 LEG1Q6P5S2 330 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 MTSS1LQ765P7 747 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 C12orf40Q86WS4 652 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 SKA3Q8IX90 412 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 OR52E1Q8NGJ3 308 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 OR2L8Q8NGY9 312 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 STOML3Q8TAV4 291 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 FAM3DQ96BQ1 224 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZBTB8AQ96BR9 441 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 NRIP2Q9BQI9 281 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 SEMA6CQ9H3T2 930 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 MYOZ1Q9NP98 299 aaPredicted RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 CDV3Q9UKY7 258 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 A0A1W2PPE3 182 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF705EA8MWA4 302 aaPredicted RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 DCTN6O00399 190 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 CCL16O15467 120 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 BRINP1O60477 761 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 PRNPP04156 253 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 MUC1P15941 1255 aaPredicted RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 AVPR2P30518 371 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 RBM34P42696 430 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 CDKN2AP42771 156 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 TSFMP43897 325 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 PPP1R1AQ13522 171 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 FAM53BQ14153 422 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 PEA15Q15121 130 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 USP53Q70EK8 1073 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 RHOUQ7L0Q8 258 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF595Q8IYB9 648 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 SLC43A2Q8N370 569 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 RAB42Q8N4Z0 105 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF676Q8N7Q3 588 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZSCAN1Q8NBB4 408 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 MFSD9Q8NBP5 474 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 OR2G2Q8NGZ5 317 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF417Q8TAU3 575 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZCCHC10Q8TBK6 192 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZC3H10Q96K80 434 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 LMF1Q96S06 567 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 SLC6A7Q99884 636 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 CST11Q9H112 138 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ATG5Q9H1Y0 275 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 ZMAT3Q9HA38 289 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 DUSP22Q9NRW4 184 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 DNAJB12Q9NXW2 375 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 RCC2Q9P258 522 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 MIOXQ9UGB7 285 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 KCNK6Q9Y257 313 aa9.86□□□□□ -0.83
ZNF558-201ENST00000301475 FARSAQ9Y285 508 aaKnown RBP9.86□□□□□ -0.83
ZNF558-201ENST00000301475 F8VVB4 439 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 F8VWA3 439 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 UBE2CO00762 179 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SSX5O60225 188 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 CDC40O60508 579 aaKnown RBP eCLIP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 S100A8P05109 93 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 C8AP07357 584 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 DCNP07585 359 aaKnown RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 CPMP14384 443 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ZBTB25P24278 435 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 RAB5BP61020 215 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 C5orf46Q6UWT4 87 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ADAMTSL4Q6UY14 1074 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SLC29A4Q7RTT9 530 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 PRSS35Q8N3Z0 413 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TMEM229BQ8NBD8 167 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 INO80EQ8NBZ0 244 aaPredicted RBP9.85□□□□□ -0.83
ZNF558-201ENST00000301475 SLC30A7Q8NEW0 376 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 OR10R2Q8NGX6 335 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 MCHR2Q969V1 340 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 MRGPRFQ96AM1 343 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 CAPN10Q9HC96 672 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 MMP26Q9NRE1 261 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 WBP1LQ9NX94 342 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 IKZF2Q9UKS7 526 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 TBX21Q9UL17 535 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 LOC100509620A0A075B734 347 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 ZNF860A6NHJ4 632 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 LRRC72A6NJI9 287 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 C1QTNF3-AMACRE9PGA6 284 aa9.85□□□□□ -0.83
ZNF558-201ENST00000301475 RDH16O75452 317 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms