RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NEUROD4Q9HD90 331 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 FBXO34Q9NWN3 711 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CARHSP1Q9Y2V2 147 aaKnown RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 LATO43561 262 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 DDTP30046 118 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 SLC9A3R2Q15599 337 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CDNFQ49AH0 187 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 ATPAF1Q5TC12 328 aaPredicted RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 LIPNQ5VXI9 398 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 SKA3Q8IX90 412 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 BPIFB2Q8N4F0 458 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 ARL14EPQ8N8R7 260 aaPredicted RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 POMGNT2Q8NAT1 580 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 RNASE11Q8TAA1 199 aaKnown RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 SUN3Q8TAQ9 357 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 MITD1Q8WV92 249 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 FAM46BQ96A09 425 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CXorf40BQ96DE9 158 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 G6PC3Q9BUM1 346 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CST11Q9H112 138 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 TRBV23OR9-2A0A075B6M9 112 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 ELOA3DA6NLF2 546 aaPredicted RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 NPC1O15118 1278 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 PPIHO43447 177 aaKnown RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 UGDHO60701 494 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 THEGLP0DJG4 465 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 PRSS3P35030 304 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 C21orf58P58505 322 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CXADRP78310 365 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 ELOA3BQ3SY89 546 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 HENMT1Q5T8I9 393 aaKnown RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 C17orf78Q8N4C9 275 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 ELOA3Q8NG57 546 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 OR6N1Q8NGY5 312 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 SUSD6Q92537 303 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CDS1Q92903 461 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 FOXRED1Q96CU9 486 aaPredicted RBP13.13□□□□□ -0.31
CDT1-201ENST00000301019 CMBLQ96DG6 245 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 DEFB118Q96PH6 123 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 OR7D2Q96RA2 312 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 TPSD1Q9BZJ3 242 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 SYT4Q9H2B2 425 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 CA14Q9ULX7 337 aa13.13□□□□□ -0.31
CDT1-201ENST00000301019 ZNF705GA8MUZ8 300 aaPredicted RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 LEFTY2O00292 366 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 GLSO94925 669 aaPredicted RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR2F2O95006 317 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 PAPLNO95428 1278 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 HEXBP07686 556 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 HIST1H1CP16403 213 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 RBP2P50120 134 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 TAS2R60P59551 318 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 AP1S1P61966 158 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 SMAD4Q13485 552 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR2F1Q13607 317 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 PLEKHS1Q5SXH7 462 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 GABRG1Q8N1C3 465 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 ADAD2Q8NCV1 583 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR2A12Q8NGT7 310 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR14K1Q8NGZ2 314 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR51F2Q8NH61 342 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 BPIFA2Q96DR5 249 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 PIK3IP1Q96FE7 263 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 KIRREL1Q96J84 757 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 PRDM13Q9H4Q3 707 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 CLDND1Q9NY35 253 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 MRPS33Q9Y291 106 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 H7C417 338 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 CTDSPLO15194 276 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 RNF4P78317 190 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 ADAM8P78325 824 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 MRPS10P82664 201 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 MAMDC2Q7Z304 686 aaPredicted RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 TMEM173Q86WV6 379 aaPredicted RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 DND1Q8IYX4 353 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR5M8Q8NGP6 311 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 OR56A3Q8NH54 315 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 SEC61A2Q9H9S3 476 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 GAR1Q9NY12 217 aaKnown RBP13.12□□□□□ -0.31
CDT1-201ENST00000301019 MTFP1Q9UDX5 166 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 IL36AQ9UHA7 158 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 IER3IP1Q9Y5U9 82 aa13.12□□□□□ -0.31
CDT1-201ENST00000301019 TRAV1-2A0A0B4J238 106 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 DCDC2BA2VCK2 349 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 PEX12O00623 359 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 BHLHE40O14503 412 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 ADH1CP00326 375 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 MT-ND4LP03901 98 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 SERPINF1P36955 418 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 GLP1RP43220 463 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 MST1LQ2TV78 715 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 LCN10Q6JVE6 187 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 MFSD12Q6NUT3 480 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 RTN4RL2Q86UN3 420 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 PARGQ86W56 976 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 SLC35F2Q8IXU6 374 aa13.11□□□□□ -0.31
CDT1-201ENST00000301019 CMTM8Q8IZV2 173 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms