RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SNRPEP62304 92 aaKnown RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 HLXQ14774 488 aaPredicted RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 LRRC37A5PQ49AS3 106 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 UBE2NLQ5JXB2 153 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 SLC22A10Q63ZE4 541 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 BTN2A1Q7KYR7 527 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 TMEM185AQ8NFB2 350 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 BPIFCQ8NFQ6 507 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 OR5AK2Q8NH90 309 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 HGDQ93099 445 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 MRPL48Q96GC5 212 aaKnown RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 SLC19A3Q9BZV2 496 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 GRHPRQ9UBQ7 328 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 LAMP5Q9UJQ1 280 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 PURGQ9UJV8 347 aaKnown RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 CDV3Q9UKY7 258 aaKnown RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 RTTNQ86VV8 2226 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 ITGA10O75578 1167 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 KRT33AO76009 404 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 HIST1H2ABP04908 130 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 MST1P26927 711 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 RAD52P43351 418 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 OR1D4P47884 311 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 CCR9P51686 369 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 GAS6Q14393 721 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 YOD1Q5VVQ6 348 aaPredicted RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 LRRC69Q6ZNQ3 347 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 SLC35D2Q76EJ3 337 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 HIST3H2AQ7L7L0 130 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 SYS1Q8N2H4 156 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 OR52B4Q8NGK2 314 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 OR10AC1Q8NH08 325 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 OR56B4Q8NH76 319 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 SFT2D1Q8WV19 159 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 SMIM4Q8WVI0 70 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 HIST1H2ACQ93077 130 aa12.22□□□□□ -0.45
CTDP1-202ENST00000299543 MYEF2Q9P2K5 600 aaKnown RBP12.22□□□□□ -0.45
CTDP1-202ENST00000299543 C17orf105B2RV13 164 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 GABRG2P18507 467 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 PSMB1P20618 241 aaKnown RBP12.21□□□□□ -0.45
CTDP1-202ENST00000299543 CDK2P24941 298 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 PRAMEF17Q5VTA0 474 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 SLITRK4Q8IW52 837 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 OR10K1Q8NGX5 313 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 OR1F2PQ96R84 312 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 SYT4Q9H2B2 425 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 KLHL9Q9P2J3 617 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 A0A1B0GVI7 797 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 CTNSO60931 367 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 PEX14O75381 377 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 ZNF528Q3MIS6 628 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 OVCH1Q7RTY7 1134 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 OR51A4Q8NGJ6 313 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 OR8S1Q8NH09 359 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 ZNF426Q9BUY5 554 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 TPSD1Q9BZJ3 242 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 SEMA6CQ9H3T2 930 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 WDR76Q9H967 626 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 NOX3Q9HBY0 568 aa12.21□□□□□ -0.45
CTDP1-202ENST00000299543 SCDO00767 359 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 YKT6O15498 198 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 HCRTR2O43614 444 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 FOXS1O43638 330 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 GLCEO94923 617 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 PLA2G7Q13093 441 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 KLF9Q13886 244 aaPredicted RBP12.21□□□□□ -0.46
CTDP1-202ENST00000299543 THAP6Q8TBB0 222 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 KTI12Q96EK9 354 aaPredicted RBP12.21□□□□□ -0.46
CTDP1-202ENST00000299543 MNTQ99583 582 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 GFI1Q99684 422 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 KCNK15Q9H427 330 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 EXOSC3Q9NQT5 275 aaKnown RBP12.21□□□□□ -0.46
CTDP1-202ENST00000299543 POLE3Q9NRF9 147 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 MIOXQ9UGB7 285 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 OR5V1Q9UGF6 321 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 MKL2Q9ULH7 1088 aa12.21□□□□□ -0.46
CTDP1-202ENST00000299543 SUSD5O60279 629 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 KLK3P07288 261 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 SQSTM1Q13501 440 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 CLINT1Q14677 625 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 SMCO1Q147U7 214 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 C1QL3Q5VWW1 255 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 FAM199XQ6PEV8 388 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 TSEN15Q8WW01 171 aaKnown RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 RGP1Q92546 391 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 SLC25A38Q96DW6 304 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 DNTTIP1Q9H147 329 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 CD207Q9UJ71 328 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 TMEM184BQ9Y519 407 aaPredicted RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 KIR2DS5A0A0G2JLQ3 304 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 A0A0G2JNG1 304 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 D6RAR5 112 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 KIR2DS3K7RE56 304 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 TACSTD2P09758 323 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 UBE2IP63279 158 aaKnown RBP12.2□□□□□ -0.46
CTDP1-202ENST00000299543 BIKQ13323 160 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 KIR2DS5Q14953 304 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 STAC2Q6ZMT1 411 aa12.2□□□□□ -0.46
CTDP1-202ENST00000299543 TTLL10Q6ZVT0 673 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms