RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GID4Q8IVV7 300 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 GCNT2Q8N0V5 402 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 LRRC75AQ8NAA5 344 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 FAM83FQ8NEG4 500 aaPredicted RBP18.62■□□□□ 0.57
SMCO4-201ENST00000298966 MYDGFQ969H8 173 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 SLC25A36Q96CQ1 311 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 SIGLEC11Q96RL6 698 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 IL4I1Q96RQ9 567 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.62■□□□□ 0.573e-6■■■■□ 23.8
SMCO4-201ENST00000298966 ROS1P08922 2347 aa18.62■□□□□ 0.57
SMCO4-201ENST00000298966 LRRN3E7EW58 273 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 PTGES3LE9PB15 166 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 SIAH2O43255 324 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 RGS10O43665 173 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 EIF1BO60739 113 aaKnown RBP18.61■□□□□ 0.57
SMCO4-201ENST00000298966 PPP1R3DO95685 299 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 IGHMP01871 453 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 AQP2P41181 271 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 PTH2RP49190 550 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 SRYQ05066 204 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 ARMC4Q5T2S8 1044 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 FAM205BPQ63HN1 556 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 TMPPEQ6ZT21 453 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 PRSS48Q7RTY5 328 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 SPARTQ8N0X7 666 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 SVOPQ8N4V2 548 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 ARL5BQ96KC2 179 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 LRR1Q96L50 414 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 SFXN2Q96NB2 322 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 WFIKKN1Q96NZ8 548 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 ERMAPQ96PL5 475 aaPredicted RBP18.61■□□□□ 0.57
SMCO4-201ENST00000298966 SNX18Q96RF0 628 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 NPAS1Q99742 590 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 INIPQ9NRY2 104 aa18.61■□□□□ 0.57
SMCO4-201ENST00000298966 H2AFY2Q9P0M6 372 aaPredicted RBP18.61■□□□□ 0.57
SMCO4-201ENST00000298966 A0A1W2PNV4 684 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 MCIDASD6RGH6 385 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 H3BML4 177 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 PLPP3O14495 311 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 ENTPD6O75354 484 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 ADORA3P0DMS8 318 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 CRYGSP22914 178 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 SDHAP31040 664 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 SLC15A1P46059 708 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 GTF2A1P52655 376 aaPredicted RBP18.6■□□□□ 0.57
SMCO4-201ENST00000298966 B3GALT5-AS1P59052 145 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 CTXN1P60606 82 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 OR7A5Q15622 319 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 PDSS1Q5T2R2 415 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 ESPNLQ6ZVH7 1005 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 KCTD8Q6ZWB6 473 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 ANKK1Q8NFD2 765 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 ZHX1-C8orf76Q96EF9 292 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 KLHL15Q96M94 604 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 OR5B2Q96R09 309 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 UCN2Q96RP3 112 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 COPS4Q9BT78 406 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 MED18Q9BUE0 208 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 KATNB1Q9BVA0 655 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 ERVK-18Q9QC07 812 aa18.6■□□□□ 0.57
SMCO4-201ENST00000298966 USF3Q68DE3 2245 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 RAI1Q7Z5J4 1906 aaPredicted RBP18.59■□□□□ 0.57
SMCO4-201ENST00000298966 LOC102725191A0A1B0GVB3 256 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 SHISA8B8ZZ34 492 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 M0R082 166 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 MSTNO14793 375 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 IMPDH2P12268 514 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 TTKP33981 857 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 MVKQ03426 396 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 PUDPQ08623 228 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 FAM27E3Q08E93 113 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 TMEM176BQ3YBM2 270 aaPredicted RBP18.59■□□□□ 0.57
SMCO4-201ENST00000298966 KLHL22Q53GT1 634 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 HDDC2Q7Z4H3 204 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 ADGRE4PQ86SQ3 457 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 ADCK1Q86TW2 530 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 MOSPD2Q8NHP6 518 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 ZNF417Q8TAU3 575 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 SGCDQ92629 289 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 GGHQ92820 318 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 ZNF587Q96SQ5 575 aaPredicted RBP18.59■□□□□ 0.57
SMCO4-201ENST00000298966 NAA11Q9BSU3 229 aaPredicted RBP18.59■□□□□ 0.57
SMCO4-201ENST00000298966 MRPS18AQ9NVS2 196 aaKnown RBP18.59■□□□□ 0.57
SMCO4-201ENST00000298966 TAS2R5Q9NYW4 299 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 DNAJC27Q9NZQ0 273 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 IL20RAQ9UHF4 553 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 IER3IP1Q9Y5U9 82 aa18.59■□□□□ 0.57
SMCO4-201ENST00000298966 A0A1W2PRG6 482 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 PRR23D1E9PI22 279 aaPredicted RBP18.58■□□□□ 0.56
SMCO4-201ENST00000298966 SULT2B1O00204 365 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 VAMP5O95183 116 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 CDK1P06493 297 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 PRR23D2P0DMB1 279 aaPredicted RBP18.58■□□□□ 0.56
SMCO4-201ENST00000298966 IL11P20809 199 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 DAP3P51398 398 aaKnown RBP18.58■□□□□ 0.56
SMCO4-201ENST00000298966 NUDT6P53370 316 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 LGALS3BPQ08380 585 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 AADACL4Q5VUY2 407 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 PAQR6Q6TCH4 344 aa18.58■□□□□ 0.56
SMCO4-201ENST00000298966 PLXDC2Q6UX71 529 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms