RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 SNAP29O95721 258 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 PTHP01270 115 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 MT-ND1P03886 318 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 MSMBP08118 114 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 GAAP10253 952 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 ZNF250P15622 560 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 ZNF84P51523 738 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 CCL8P80075 99 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 PLP2Q04941 152 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 RPL18Q07020 188 aaKnown RBP16.77■□□□□ 0.28
CXCL3-201ENST00000296026 NRN1LQ496H8 165 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 TMEM154Q6P9G4 183 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 CCDC80Q76M96 950 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 SYT14Q8NB59 555 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 RBM15BQ8NDT2 890 aaKnown RBP16.77■□□□□ 0.28
CXCL3-201ENST00000296026 NOXO1Q8NFA2 376 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 OR1J2Q8NGS2 313 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 ZNF519Q8TB69 540 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 SNX33Q8WV41 574 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 C11orf40Q8WZ69 217 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 MRPL13Q9BYD1 178 aaKnown RBP16.77■□□□□ 0.28
CXCL3-201ENST00000296026 METTL17Q9H7H0 456 aaPredicted RBP16.77■□□□□ 0.28
CXCL3-201ENST00000296026 NANOGQ9H9S0 305 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 NPHS2Q9NP85 383 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 HINT3Q9NQE9 182 aaKnown RBP16.77■□□□□ 0.28
CXCL3-201ENST00000296026 SH3GLB1Q9Y371 365 aa16.77■□□□□ 0.28
CXCL3-201ENST00000296026 IQCMA0A1B0GVH7 501 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 CDC14BO60729 498 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 FUT1P19526 365 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 RAD52P43351 418 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 UGT2B15P54855 530 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 UCP2P55851 309 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 LMO4P61968 165 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 NANOGP8Q6NSW7 305 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 NKAIN4Q8IVV8 208 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 LRRC18Q8N456 261 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 ICA1LQ8NDH6 482 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 PFN4Q8NHR9 129 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 TMEM255BQ8WV15 326 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 ASB10Q8WXI3 467 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 LRRC37BQ96QE4 947 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 SEPHS2Q99611 448 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 BCL2L14Q9BZR8 327 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 LRMDAQ9H2I8 198 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 INIPQ9NRY2 104 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 SLCO1C1Q9NYB5 712 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 GRIP1Q9Y3R0 1128 aa16.76■□□□□ 0.27
CXCL3-201ENST00000296026 CENPBD1B2RD01 187 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 FBP2O00757 339 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 TRMUO75648 421 aaKnown RBP16.75■□□□□ 0.27
CXCL3-201ENST00000296026 OR7A10O76100 309 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 MMP7P09237 267 aaPredicted RBP16.75■□□□□ 0.27
CXCL3-201ENST00000296026 ACADSP16219 412 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 TNFRSF1BP20333 461 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 AQP2P41181 271 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 RBM34P42696 430 aaKnown RBP16.75■□□□□ 0.27
CXCL3-201ENST00000296026 TAS2R41P59536 307 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 CYLC2Q14093 348 aaPredicted RBP16.75■□□□□ 0.27
CXCL3-201ENST00000296026 PCGF3Q3KNV8 242 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 RABL3Q5HYI8 236 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 DEF8Q6ZN54 512 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 HDDC2Q7Z4H3 204 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 OR51F2Q8NH61 342 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 SGTBQ96EQ0 304 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 C20orf141Q9NUB4 165 aa16.75■□□□□ 0.27
CXCL3-201ENST00000296026 A0A0G2JND7 137 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 HMGB1P1B2RPK0 211 aaPredicted RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 EDF1O60869 148 aaKnown RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 SHOX2O60902 331 aaPredicted RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 APLNRP35414 380 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 DAP3P51398 398 aaKnown RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 HSF2Q03933 536 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 C10orf128Q5T292 105 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 METTL21CQ5VZV1 264 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 SHQ1Q6PI26 577 aaKnown RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 MEX3DQ86XN8 651 aaKnown RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 CPEB3Q8NE35 698 aaKnown RBP16.74■□□□□ 0.27
CXCL3-201ENST00000296026 KCNN2Q9H2S1 579 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 NKIRAS2Q9NYR9 191 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 RIMS3Q9UJD0 308 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 BAG5Q9UL15 447 aa16.74■□□□□ 0.27
CXCL3-201ENST00000296026 MGRN1O60291 552 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 OR5F1O95221 314 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 VENTXO95231 258 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 SLC2A10O95528 541 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 CCNOP22674 350 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 CDAP32320 146 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 CRYBB2P43320 205 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 ZNF133P52736 654 aaPredicted RBP16.73■□□□□ 0.27
CXCL3-201ENST00000296026 MRPS34P82930 218 aaKnown RBP16.73■□□□□ 0.27
CXCL3-201ENST00000296026 MVKQ03426 396 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 PIN1Q13526 163 aaPredicted RBP16.73■□□□□ 0.27
CXCL3-201ENST00000296026 MMEL1Q495T6 779 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 PABPC1L2AQ5JQF8 200 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 ARMC4Q5T2S8 1044 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 AVPI1Q5T686 147 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 FAHD2BQ6P2I3 314 aaPredicted RBP16.73■□□□□ 0.27
CXCL3-201ENST00000296026 CALHM3Q86XJ0 350 aa16.73■□□□□ 0.27
CXCL3-201ENST00000296026 OR1J1Q8NGS3 322 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms