RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 RPS19BP1Q86WX3 136 aaKnown RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 UBE2FQ969M7 185 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 CNTNAP3Q9BZ76 1288 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 OR51B6Q9H340 312 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 MRPS2Q9Y399 296 aaKnown RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 LTBP4Q8N2S1 1624 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SERTM1A2A2V5 107 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 POM121BA6NF01 834 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 DSCR3O14972 297 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ABHD16AO95870 558 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 CBX7O95931 251 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SMAD2Q15796 467 aaKnown RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 OR51D1Q8NGF3 324 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 OR51A2Q8NGJ7 313 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 ANKRD9Q96BM1 317 aaPredicted RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 SLC38A1Q9H2H9 487 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 BIN3Q9NQY0 253 aa11.73□□□□□ -0.53
PTCD1-201ENST00000292478 COA3Q9Y2R0 106 aaPredicted RBP11.73□□□□□ -0.53
PTCD1-201ENST00000292478 CTSLP07711 333 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 CHRNB1P11230 501 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ELK1P19419 428 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ACSM5Q6NUN0 579 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 FBXW12Q6X9E4 464 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 OLIG3Q7RTU3 272 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 PRSS35Q8N3Z0 413 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 IP6K3Q96PC2 410 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
PTCD1-201ENST00000292478 NECAP2Q9NVZ3 263 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 C17orf112F2Z3M2 114 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 FABP7O15540 132 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 TBX19O60806 448 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 TCTN3Q6NUS6 607 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 SLC51BQ86UW2 128 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 FGF20Q9NP95 211 aaPredicted RBP11.72□□□□□ -0.53
PTCD1-201ENST00000292478 HINT3Q9NQE9 182 aaKnown RBP11.72□□□□□ -0.53
PTCD1-201ENST00000292478 WNT11O96014 354 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 CEACAM5P06731 702 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 SPI1P17947 270 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 AADACL3Q5VUY0 350 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 OR4N2Q8NGD1 307 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 TWSG1Q9GZX9 223 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 SAV1Q9H4B6 383 aaPredicted RBP11.72□□□□□ -0.53
PTCD1-201ENST00000292478 CDCP1Q9H5V8 836 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 LILRB5O75023 590 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 SRFP11831 508 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 CD79BP40259 229 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
PTCD1-201ENST00000292478 GPR85P60893 370 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 HSF1Q00613 529 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 AGBL4Q5VU57 503 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ARIH2OSQ8N7S6 290 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 CCDC74AQ96AQ1 378 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ABHD6Q9BV23 337 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 SMIM3Q9BZL3 60 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF385DQ9H6B1 395 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 KCNG2Q9UJ96 466 aa11.72□□□□□ -0.53
PTCD1-201ENST00000292478 TRIM64BA6NI03 449 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 C4orf47A7E2U8 309 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 SULT1C4O75897 302 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 ARRB2P32121 409 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 RFX2P48378 723 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 NKX6-1P78426 367 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-201ENST00000292478 PMPCAQ10713 525 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 FCN2Q15485 313 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 THEM4Q5T1C6 240 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 CALHM3Q86XJ0 350 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 RDH10Q8IZV5 341 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 ESX1Q8N693 406 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 OR2A1Q8NGT9 310 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 NUDT8Q8WV74 236 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF845Q96IR2 970 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-201ENST00000292478 MRGPRX1Q96LB2 322 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 MED18Q9BUE0 208 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 DYNLRB1Q9NP97 96 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 A0A1W2PPC4 97 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 C2orf72A6NCS6 295 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 TIMM8AO60220 97 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-201ENST00000292478 PNLIPRP2P54317 469 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 HBG1P69891 147 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 HBG2P69892 147 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 FAPQ12884 760 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 SELENBP1Q13228 472 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 ZNF674Q2M3X9 581 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 GLIPR1L1Q6UWM5 242 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 SLC7A5P1Q8MH63 180 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 CELF2-AS1Q8N7Q2 184 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 UBL7Q96S82 380 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-201ENST00000292478 IGLV3-16A0A075B6K0 115 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 TEX51A0A1B0GUA7 166 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 M0R082 166 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 RAB6AP20340 208 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 DOC2BQ14184 412 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 C6orf15Q6UXA7 325 aaPredicted RBP11.71□□□□□ -0.53
PTCD1-201ENST00000292478 SYT9Q86SS6 491 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 ABCA3Q99758 1704 aa11.71□□□□□ -0.53
PTCD1-201ENST00000292478 OR6C65A6NJZ3 312 aa11.71□□□□□ -0.54
PTCD1-201ENST00000292478 UPK1AO00322 258 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms