RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 POLR2J2Q9GZM3 115 aaKnown RBP8.46□□□□□ -1.06
CCDC58-201ENST00000291458 POLR2J3Q9H1A7 115 aaKnown RBP8.46□□□□□ -1.06
CCDC58-201ENST00000291458 SPAG4Q9NPE6 437 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 MAN2C1Q9NTJ4 1040 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 ARL8BQ9NVJ2 186 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 TMEM38BQ9NVV0 291 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 ZNF224Q9NZL3 707 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 AP3M1Q9Y2T2 418 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 FKBP7Q9Y680 259 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 PMF1-BGLAPU3KQ54 211 aa8.46□□□□□ -1.06
CCDC58-201ENST00000291458 IGKV1D-43A0A0B4J1Z2 117 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 A0A1W2PPL8 197 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 EFCAB9A8MZ26 197 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 H7C417 338 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 FFAR1O14842 300 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 GMNNO75496 209 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 UBL3O95164 117 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 FARS2O95363 451 aaKnown RBP8.45□□□□□ -1.06
CCDC58-201ENST00000291458 TP53P04637 393 aaPredicted RBP8.45□□□□□ -1.06
CCDC58-201ENST00000291458 ACADSP16219 412 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 NPR2P20594 1047 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 PRDX6P30041 224 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 RPL4P36578 427 aaKnown RBP8.45□□□□□ -1.06
CCDC58-201ENST00000291458 SLC9A3P48764 834 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 CTXN1P60606 82 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 RAB1AP62820 205 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 GALK2Q01415 458 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 GLO1Q04760 184 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 KRTAP1-1Q07627 177 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 GGTLC2Q14390 218 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 MAD2L1BPQ15013 274 aaPredicted RBP8.45□□□□□ -1.06
CCDC58-201ENST00000291458 MST1LQ2TV78 715 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 GLYATQ6IB77 296 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 LRFN4Q6PJG9 635 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 HACD2Q6Y1H2 254 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 SLC16A14Q7RTX9 510 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 CYP4Z1Q86W10 505 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 OR4F15Q8NGB8 312 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 OR52J3Q8NH60 311 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 MCHR2Q969V1 340 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 FAM46AQ96IP4 442 aaKnown RBP8.45□□□□□ -1.06
CCDC58-201ENST00000291458 TSPAN32Q96QS1 320 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 PLK3Q9H4B4 646 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 RERGLQ9H628 205 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 CDH20Q9HBT6 801 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 YAE1D1Q9NRH1 226 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 B3GNT2Q9NY97 397 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 ABCD2Q9UBJ2 740 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 RPS6KA6Q9UK32 745 aa8.45□□□□□ -1.06
CCDC58-201ENST00000291458 CHD3Q12873 2000 aaKnown RBP8.45□□□□□ -1.06
CCDC58-201ENST00000291458 A0A087WUU8 490 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 A0A1W2PPW3 197 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ADRA2AP08913 450 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 OR8G3PP0DMU2 310 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 THRBP10828 461 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ZNF14P17017 642 aaPredicted RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ZNF16P17020 682 aaPredicted RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 CCNOP22674 350 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ALDH3B1P43353 468 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 EFNA4P52798 201 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ERVS71-1P61550 626 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ERVK-25P63136 954 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 SPIBQ01892 262 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 HSF2Q03933 536 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 SGCAQ16586 387 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 MSMPQ1L6U9 139 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 OTPQ5XKR4 325 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 TMEM53Q6P2H8 277 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 RRM2BQ7LG56 351 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 HDDC2Q7Z4H3 204 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 OAFQ86UD1 273 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 CCDC36Q8IYA8 594 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 PAQR4Q8N4S7 273 aaPredicted RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 NUP37Q8NFH4 326 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 BOD1Q96IK1 185 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 MRPL37Q9BZE1 423 aaKnown RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 MOV10Q9HCE1 1003 aaKnown RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 CCNB1IP1Q9NPC3 277 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 FRRS1LQ9P0K9 344 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 IL20RAQ9UHF4 553 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 TAGLN3Q9UI15 199 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ZNF346Q9UL40 294 aaKnown RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ARL2BPQ9Y2Y0 163 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ADAM18Q9Y3Q7 739 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 FAM32AQ9Y421 112 aaKnown RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ENPP4Q9Y6X5 453 aa8.44□□□□□ -1.06
CCDC58-201ENST00000291458 FN1P02751 2386 aaKnown RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 ZNF469Q96JG9 3925 aaPredicted RBP8.44□□□□□ -1.06
CCDC58-201ENST00000291458 CSPG4Q6UVK1 2322 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 MAP1AP78559 2803 aaPredicted RBP8.43□□□□□ -1.06
CCDC58-201ENST00000291458 TRBV4-1A0A0J9YWV2 114 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 B9A039 149 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 NDUFAB1O14561 156 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 CDC42EP2O14613 210 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 ARPC2O15144 300 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 H1F0P07305 194 aaKnown RBP8.43□□□□□ -1.06
CCDC58-201ENST00000291458 APEX1P27695 318 aaKnown RBP8.43□□□□□ -1.06
CCDC58-201ENST00000291458 PDLIM4P50479 330 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 VLDLRP98155 873 aa8.43□□□□□ -1.06
CCDC58-201ENST00000291458 C3orf36Q3SXR2 165 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms