RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 SHARPINQ9H0F6 387 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 YKT6O15498 198 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 SOD1P00441 154 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 FURINP09958 794 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 SMIM18P0DKX4 95 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CD80P33681 288 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CLDN20P56880 219 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ARG2P78540 354 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ACOT6Q3I5F7 207 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 OTUD1Q5VV17 481 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 TMEM25Q86YD3 366 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ARRDC2Q8TBH0 407 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CXXC1Q9P0U4 656 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 NSG2Q9Y328 171 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 PTRH2Q9Y3E5 179 aaKnown RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 TMED7-TICAM2A0A0A6YYA0 188 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 LAMTOR5O43504 91 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 GPX2P18283 190 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 HNRNPA3P51991 378 aaKnown RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 H2BFWTQ7Z2G1 175 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 PELI3Q8N2H9 469 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNRF4Q8WWF5 429 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 OPA3Q9H6K4 179 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 TXNRD2Q9NNW7 524 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 TMED7Q9Y3B3 224 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 EMC9Q9Y3B6 208 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 A0A1B0GWA3 101 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 OR52A4PA6NMU1 304 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 PRAMEF4O60810 478 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 POLR2IP36954 125 aaKnown RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CTSCP53634 463 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 COL9A2Q14055 689 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 RPL7L1Q6DKI1 246 aaKnown RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 BAP18Q8IXM2 172 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 OR5K2Q8NHB8 316 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CHAC2Q8WUX2 184 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 FOXN4Q96NZ1 517 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ZIC5Q96T25 663 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 NUDT22Q9BRQ3 303 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 GINS3Q9BRX5 216 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CABLES2Q9BTV7 478 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 BARHL1Q9BZE3 327 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 SPATA6Q9NWH7 488 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CYB5R1Q9UHQ9 305 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 PIAS3Q9Y6X2 628 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ARHGEF28Q8N1W1 1705 aaKnown RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 GLAP06280 429 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CSF3P09919 207 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 MOGAT2Q3SYC2 334 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 AGBL4Q5VU57 503 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 TBPL2Q6SJ96 375 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ZNF852Q6ZMS4 543 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 GDPD3Q7L5L3 318 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 RNF175Q8N4F7 328 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 NME2P1O60361 137 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CD37P11049 281 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 DRD1P21728 446 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ELLP55199 621 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 UBE2IP63279 158 aaKnown RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ETFRF1Q6IPR1 90 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 CLEC9AQ6UXN8 241 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 PRICKLE2Q7Z3G6 844 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 GABRG1Q8N1C3 465 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 KLF16Q9BXK1 252 aaPredicted RBP8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 RAB18Q9NP72 206 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 ARL2-SNX15V9GYD0 113 aa8.03□□□□□ -1.12
SCUBE3-201ENST00000274938 KIF1AQ12756 1690 aa8.02□□□□□ -1.12
SCUBE3-201ENST00000274938 DCTN6O00399 190 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 TIMM8AO60220 97 aaPredicted RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 TPOP07202 933 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 PAX6P26367 422 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 FCER1GP30273 86 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 PDZD11Q5EBL8 140 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 ADGRG3Q86Y34 549 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 ARSGQ96EG1 525 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 ZNF845Q96IR2 970 aaPredicted RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 RFPL4AA6NLU0 287 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 RFPL4AL1F8VTS6 287 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 GPR171O14626 319 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 NXPH2O95156 264 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 GSTP1P09211 210 aaKnown RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 GABRB1P18505 474 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 FKBP2P26885 142 aaKnown RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 PTTG1IPP53801 180 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 TMEM176BQ3YBM2 270 aaPredicted RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 HTR3DQ70Z44 454 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 CPEB2Q7Z5Q1 589 aaKnown RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 JAM3Q9BX67 310 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 UBQLN3Q9H347 655 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 SEMA6CQ9H3T2 930 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 PADI1Q9ULC6 663 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 MMACHCQ9Y4U1 282 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 OR5H15A6NDH6 313 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 OR5H1A6NKK0 313 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 CPEP16870 476 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 FCGR2CP31995 323 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 DHODHQ02127 395 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 EXOSC2Q13868 293 aaKnown RBP8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 AANATQ16613 207 aa8.02□□□□□ -1.13
SCUBE3-201ENST00000274938 ZNF574Q6ZN55 896 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms