RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 UPK1BO75841 260 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 GABRA5P31644 462 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 PTGS2P35354 604 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 CCL11P51671 97 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 CLDN20P56880 219 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 OR12D2P58182 307 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 RAC3P60763 192 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
TRIM23-202ENST00000274327 ARG2P78540 354 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 ESPNLQ6ZVH7 1005 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 USP43Q70EL4 1123 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 TMEM251Q8N6I4 163 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 ZFP41Q8N8Y5 198 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 ZHX1-C8orf76Q96EF9 292 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 TRMT61AQ96FX7 289 aaKnown RBP12.97□□□□□ -0.33
TRIM23-202ENST00000274327 MRPL13Q9BYD1 178 aaKnown RBP12.97□□□□□ -0.33
TRIM23-202ENST00000274327 SRXN1Q9BYN0 137 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 DCSTAMPQ9H295 470 aa12.97□□□□□ -0.33
TRIM23-202ENST00000274327 ZNF670-ZNF695F2Z2N8 137 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 H0YC42 278 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 J3QLW9 94 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 CEACAM4O75871 244 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 VAMP5O95183 116 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 GPANK1O95872 356 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 ZNF19P17023 458 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 ZNF43P17038 809 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 RFC3P40938 356 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 SUCLG1P53597 346 aaKnown RBP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 ETFDHQ16134 617 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 NDUFA5Q16718 116 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 DEFB109BQ30KR1 87 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 ZNF404Q494X3 552 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 ZNF684Q5T5D7 378 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 CD200R1LQ6Q8B3 271 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 HDDC2Q7Z4H3 204 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 GPAT4Q86UL3 456 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 CADM3Q8N126 398 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 ZFP62Q8NB50 900 aaPredicted RBP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 OR6X1Q8NH79 312 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 MCFD2Q8NI22 146 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 MRPL48Q96GC5 212 aaKnown RBP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 INTS14Q96SY0 518 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 EMC6Q9BV81 110 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 RERGLQ9H628 205 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 MOV10Q9HCE1 1003 aaKnown RBP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 TRIM36Q9NQ86 728 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 MRPL22Q9NWU5 206 aaKnown RBP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 QPCTLQ9NXS2 382 aa12.96□□□□□ -0.33
TRIM23-202ENST00000274327 SIRT4Q9Y6E7 314 aaPredicted RBP12.96□□□□□ -0.33
TRIM23-202ENST00000274327 PNMA8CA0A1B0GUJ8 204 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 E9PI62 339 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 LRRTM2O43300 516 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 CELA3AP09093 270 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PGA4P0DJD7 388 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PGA3P0DJD8 388 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PSKH1P11801 424 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 CELP19835 753 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SDHBP21912 280 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 ETV6P41212 452 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 STARP49675 285 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 TNFSF10P50591 281 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 CLDN15P56746 228 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 TAS2R43P59537 309 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 FOXC1Q12948 553 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 TP53I3Q53FA7 332 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 ZNF766Q5HY98 468 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 DNM1P34Q6PK57 102 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SYT14Q8NB59 555 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 OR2V1Q8NHB1 315 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SLC25A44Q96H78 314 aaPredicted RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 ADAD1Q96M93 576 aaKnown RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 UCN2Q96RP3 112 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 WDR76Q9H967 626 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SSR3Q9UNL2 185 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 WASF3Q9UPY6 502 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 KLHDC2Q9Y2U9 406 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PMF1-BGLAPU3KQ54 211 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 IGKV1D-43A0A0B4J1Z2 117 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SLC35F4A4IF30 521 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 METTL15A6NJ78 407 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 FAM166BA8MTA8 275 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PRR32B1ATL7 298 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 EIF1AYO14602 144 aaKnown RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SMAD9O15198 467 aaKnown RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 TLX3O43711 291 aaPredicted RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 KHDRBS3O75525 346 aaKnown RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 CD53P19397 219 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 POU3F2P20265 443 aaPredicted RBP12.95□□□□□ -0.34
TRIM23-202ENST00000274327 MAGEA5P43359 124 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PLGLB1Q02325 96 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 FMODQ06828 376 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 HBMQ6B0K9 141 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 TMEM178AQ8NBL3 297 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 NOXO1Q8NFA2 376 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 OR6N2Q8NGY6 317 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 SNX33Q8WV41 574 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 PELI1Q96FA3 418 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 TTTY10Q9BZA0 68 aa12.95□□□□□ -0.34
TRIM23-202ENST00000274327 EXOSC4Q9NPD3 245 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms