RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 BLVRAP53004 296 aa15.01□□□□□ -0.01
VPS54-201ENST00000272322 TAS2R20P59543 309 aa15.01□□□□□ -0.01
VPS54-201ENST00000272322 EIF2B1Q14232 305 aaKnown RBP15.01□□□□□ -0.01
VPS54-201ENST00000272322 COL28A1Q2UY09 1125 aa15.01□□□□□ -0.01
VPS54-201ENST00000272322 WDFY1Q8IWB7 410 aa15.01□□□□□ -0.01
VPS54-201ENST00000272322 ADIPOR1Q96A54 375 aa15.01□□□□□ -0.01
VPS54-201ENST00000272322 CCDC74AQ96AQ1 378 aa15.01□□□□□ -0.01
VPS54-201ENST00000272322 FER1L5A0AVI2 2057 aa15□□□□□ -0.01
VPS54-201ENST00000272322 ALX3O95076 343 aa15□□□□□ -0.01
VPS54-201ENST00000272322 CFDP00746 253 aaPredicted RBP15□□□□□ -0.01
VPS54-201ENST00000272322 ZP1P60852 638 aa15□□□□□ -0.01
VPS54-201ENST00000272322 INSM1Q01101 510 aaPredicted RBP15□□□□□ -0.01
VPS54-201ENST00000272322 DMWDQ09019 674 aa15□□□□□ -0.01
VPS54-201ENST00000272322 DND1Q8IYX4 353 aaKnown RBP15□□□□□ -0.01
VPS54-201ENST00000272322 SLC25A45Q8N413 288 aa15□□□□□ -0.01
VPS54-201ENST00000272322 CYYR1Q96J86 154 aa15□□□□□ -0.01
VPS54-201ENST00000272322 OR1F2PQ96R84 312 aa15□□□□□ -0.01
VPS54-201ENST00000272322 WWTR1Q9GZV5 400 aa15□□□□□ -0.01
VPS54-201ENST00000272322 FOXJ3Q9UPW0 622 aa15□□□□□ -0.01
VPS54-201ENST00000272322 OR4C45A6NMZ5 311 aa15□□□□□ -0.01
VPS54-201ENST00000272322 ENPP1P22413 925 aa15□□□□□ -0.01
VPS54-201ENST00000272322 POU3F1Q03052 451 aaPredicted RBP15□□□□□ -0.01
VPS54-201ENST00000272322 ZNF782Q6ZMW2 699 aaPredicted RBP15□□□□□ -0.01
VPS54-201ENST00000272322 CMKLR1Q99788 373 aa15□□□□□ -0.01
VPS54-201ENST00000272322 GON7Q9BXV9 100 aa15□□□□□ -0.01
VPS54-201ENST00000272322 SEC61A2Q9H9S3 476 aa15□□□□□ -0.01
VPS54-201ENST00000272322 FITM1A5D6W6 292 aa15□□□□□ -0.01
VPS54-201ENST00000272322 LMO7DNF2Z398 122 aa15□□□□□ -0.01
VPS54-201ENST00000272322 PDCD5O14737 125 aa15□□□□□ -0.01
VPS54-201ENST00000272322 KIR3DL2P43630 455 aa15□□□□□ -0.01
VPS54-201ENST00000272322 IGLV3-21P80748 117 aaPredicted RBP15□□□□□ -0.01
VPS54-201ENST00000272322 C11orf88Q6PI97 169 aa15□□□□□ -0.01
VPS54-201ENST00000272322 PLCZ1Q86YW0 608 aa15□□□□□ -0.01
VPS54-201ENST00000272322 LRRC75AQ8NAA5 344 aa15□□□□□ -0.01
VPS54-201ENST00000272322 GPR148Q8TDV2 347 aa15□□□□□ -0.01
VPS54-201ENST00000272322 ADAMTS14Q8WXS8 1223 aa15□□□□□ -0.01
VPS54-201ENST00000272322 HOXB13Q92826 284 aaPredicted RBP15□□□□□ -0.01
VPS54-201ENST00000272322 MRPL48Q96GC5 212 aaKnown RBP15□□□□□ -0.01
VPS54-201ENST00000272322 GTPBP2Q9BX10 602 aaKnown RBP15□□□□□ -0.01
VPS54-201ENST00000272322 NIPAL2Q9H841 368 aa15□□□□□ -0.01
VPS54-201ENST00000272322 G3V3Y1 287 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 M0QYG6 137 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 PEX14O75381 377 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 GTF2F2P13984 249 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 IFNGR1P15260 489 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 PTBP1P26599 531 aaKnown RBP eCLIP14.99□□□□□ -0.015e-14■■■□□ 17.9
VPS54-201ENST00000272322 GNALP38405 381 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 NKPD1Q17RQ9 610 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 RSPO4Q2I0M5 234 aaPredicted RBP14.99□□□□□ -0.01
VPS54-201ENST00000272322 LGALSLQ3ZCW2 172 aaPredicted RBP14.99□□□□□ -0.01
VPS54-201ENST00000272322 COMMD2Q86X83 199 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 ADGRG3Q86Y34 549 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 ADAMTS18Q8TE60 1221 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 DAZLQ92904 295 aaKnown RBP14.99□□□□□ -0.01
VPS54-201ENST00000272322 IGKV1D-43A0A0B4J1Z2 117 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 A0A1W2PR77 199 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 PYCARD-AS1I3L0S3 204 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 GPRIN2O60269 458 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 TDGQ13569 410 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 GGTLC2Q14390 218 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 FNDC7Q5VTL7 733 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 CMIPQ8IY22 773 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 STT3BQ8TCJ2 826 aa14.99□□□□□ -0.01
VPS54-201ENST00000272322 ZNF775Q96BV0 537 aaPredicted RBP14.99□□□□□ -0.01
VPS54-201ENST00000272322 IGKV3-11P04433 115 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 CD53P19397 219 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 GLYATL3Q5SZD4 288 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 C1orf140Q5VVS0 124 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 C17orf107Q6ZR85 190 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 BTN2A1Q7KYR7 527 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 MAMDC2Q7Z304 686 aaPredicted RBP14.98□□□□□ -0.01
VPS54-201ENST00000272322 CHST6Q9GZX3 395 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 MRPL22Q9NWU5 206 aaKnown RBP14.98□□□□□ -0.01
VPS54-201ENST00000272322 TAS2R4Q9NYW5 299 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 RPH3AQ9Y2J0 694 aaPredicted RBP14.98□□□□□ -0.01
VPS54-201ENST00000272322 PIAS2O75928 621 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 SFTPDP35247 375 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 BTG1P62324 171 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 ELAVL1Q15717 326 aaKnown RBP14.98□□□□□ -0.01
VPS54-201ENST00000272322 SCGB2B2Q4G0G5 96 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 SLC35D3Q5M8T2 416 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 NLRC3Q7RTR2 1065 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 CDC20BQ86Y33 519 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 OR51S1Q8NGJ8 323 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 HAVCR2Q8TDQ0 301 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 PMM1Q92871 262 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 HRH3Q9Y5N1 445 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 A0A1B0GVI7 797 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 ZNF217O75362 1048 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 AHSA1O95433 338 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 PGCP20142 388 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 PRKXP51817 358 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 C2orf76Q3KRA6 126 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 LRRC37A5PQ49AS3 106 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 PRAMEF20Q5VT98 475 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 BIVMQ86UB2 503 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 CMBLQ96DG6 245 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 NXPE2Q96DL1 559 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 ABHD6Q9BV23 337 aa14.98□□□□□ -0.01
VPS54-201ENST00000272322 DLL4Q9NR61 685 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms