RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 A6NCN8 305 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 TMEM212A6NML5 194 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 SSX5O60225 188 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 SELENOFO60613 162 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 PRAMEF4O60810 478 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 FBXO24O75426 580 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 MED6O75586 246 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 SPOCK1Q08629 439 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 PRAMEF9Q5VWM5 478 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 GLDNQ6ZMI3 551 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 TMEM156Q8N614 296 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 DCBLD2Q96PD2 775 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 CRB3Q9BUF7 120 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 IFT22Q9H7X7 185 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 STEAP1Q9UHE8 339 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 PIKFYVEQ9Y2I7 2098 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 H0YGG7 62 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 KNG1P01042 644 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 F13BP05160 661 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 PNMTP11086 282 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 PPT1P50897 306 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ARF3P61204 181 aaPredicted RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 UBE2IP63279 158 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ALKBH1Q13686 389 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 DPY19L4Q7Z388 723 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ACBD4Q8NC06 268 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 FAM71CQ8NEG0 241 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 OR5M1Q8NGP8 315 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 NAT6Q93015 286 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ZMAT3Q9HA38 289 aaKnown RBP10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 ELOVL3Q9HB03 270 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 HHLA2Q9UM44 414 aa10.55□□□□□ -0.72
CLSTN3-201ENST00000266546 CACNA1BQ00975 2339 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 TRAV1-2A0A0B4J238 106 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 PPM1DO15297 605 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 OR2F2O95006 317 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 ERGP11308 486 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 IL9P15248 144 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 RAB6AP20340 208 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 CD79BP40259 229 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 OR2F1Q13607 317 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 C14orf28Q4W4Y0 310 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 AWAT2Q6E213 333 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 OR7E24Q6IFN5 339 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 LCN10Q6JVE6 187 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 MAMDC2Q7Z304 686 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SYS1Q8N2H4 156 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 C19orf47Q8N9M1 422 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 YIPF5Q969M3 257 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 ORAI1Q96D31 301 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 MS4A6EQ96DS6 147 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SCMH1Q96GD3 660 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SCARF2Q96GP6 870 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SULT4A1Q9BR01 284 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 POFUT1Q9H488 388 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SPHK1Q9NYA1 384 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 ANKRD61A6NGH8 418 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 CCSO14618 274 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 RDH16O75452 317 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 OR8U9P0C7N5 309 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC2A5P22732 501 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SERTAD2Q14140 314 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 HLXQ14774 488 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 DUSP5Q16690 384 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 DEFB133Q30KQ1 61 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 PDSS1Q5T2R2 415 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 OR52R1Q8NGF1 315 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 OR10Z1Q8NGY1 313 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 FAM3DQ96BQ1 224 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 WDR89Q96FK6 387 aaPredicted RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SLC35A4Q96G79 324 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 GPR137Q96N19 417 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 ZNF649Q9BS31 505 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 SEMA4CQ9C0C4 833 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 LSM2Q9Y333 95 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 LILRA5A6NI73 299 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 GPR75O95800 540 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 NID1P14543 1247 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 NME1P15531 152 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 MGMTP16455 207 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 STARD6P59095 220 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 GNMTQ14749 295 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 LPCAT3Q6P1A2 487 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 WDSUB1Q8N9V3 476 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 UNKLQ9H9P5 680 aaKnown RBP10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 LYRM4Q9HD34 91 aa10.54□□□□□ -0.72
CLSTN3-201ENST00000266546 TLCD2A6NGC4 264 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 OR5H14A6NHG9 310 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CDK2AP1O14519 115 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 MPIG6BO95866 241 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CSNK1EP49674 416 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 PAN3Q58A45 887 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 AADACL4Q5VUY2 407 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 LIPNQ5VXI9 398 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 CCL4L1Q8NHW4 92 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 KCMF1Q9P0J7 381 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 LRIT1Q9P2V4 623 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 NDRG3Q9UGV2 375 aa10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 LSM5Q9Y4Y9 91 aaKnown RBP10.53□□□□□ -0.72
CLSTN3-201ENST00000266546 NUP210Q8TEM1 1887 aaPredicted RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms