RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 ZDHHC22Q8N966 263 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 ZPLD1Q8TCW7 415 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 PAQR8Q8TEZ7 354 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 TCEAL3Q969E4 200 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 SEC22AQ96IW7 307 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF587Q96SQ5 575 aaPredicted RBP11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 CMSS1Q9BQ75 279 aaKnown RBP11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF251Q9BRH9 671 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 TLNRD1Q9H1K6 362 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 SLC2A8Q9NY64 477 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 CKLFQ9UBR5 152 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 NUMA1Q14980 2115 aa11.24□□□□□ -0.61
CHMP2B-201ENST00000263780 ELOA3DA6NLF2 546 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 OR52A4PA6NMU1 304 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 FAM171A2A8MVW0 826 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF208O43345 1280 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 RHOP08100 348 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 CD14P08571 375 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 CDKN2AP42771 156 aaKnown RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ID2Q02363 134 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PJVKQ0ZLH3 352 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PEA15Q15121 130 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ELOA3BQ3SY89 546 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 EMC4Q5J8M3 183 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 DRAM2Q6UX65 266 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF627Q7L945 461 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ELOA3Q8NG57 546 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZCCHC10Q8TBK6 192 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 RXFP4Q8TDU9 374 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 MITD1Q8WV92 249 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 SUSD6Q92537 303 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 NXPE3Q969Y0 559 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 TM4SF19Q96DZ7 209 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 OR1A2Q9Y585 309 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 CEP350Q5VT06 3117 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 TEX13DA0A0J9YY54 714 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PRRT4C9JH25 899 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 M0QYG6 137 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 NUDT21O43809 227 aaKnown RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 IL2RAP01589 272 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 FABP1P07148 127 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ITGA5P08648 1049 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZBTB25P24278 435 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 MPZP25189 248 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PAX6P26367 422 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 KCNJ3P48549 501 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ADAM8P78325 824 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ELOCQ15369 112 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 SCGB2B2Q4G0G5 96 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 FDX2Q6P4F2 183 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF584Q8IVC4 421 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 EXD3Q8N9H8 876 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 OR4K17Q8NGC6 315 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 LCN9Q8WX39 176 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ING5Q8WYH8 240 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 HOXB13Q92826 284 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 TINAGL1Q9GZM7 467 aaPredicted RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 SEMA6CQ9H3T2 930 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 SGCEO43556 437 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 EIF3GO75821 320 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF735P0CB33 412 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PSMB6P28072 239 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 SDHAP31040 664 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PPICP45877 212 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 AKR1C2P52895 323 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 AKR1C1Q04828 323 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 EXOSC7Q15024 291 aaKnown RBP11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 NR0B2Q15466 257 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF141Q15928 474 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 AWAT2Q6E213 333 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 FAM166AQ6J272 317 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 UNQ6126/PRO20091Q6UXV3 157 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 RTL10Q7L3V2 364 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZAR1Q86SH2 424 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF440Q8IYI8 595 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 PTDSS2Q9BVG9 487 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 SMCO4Q9NRQ5 59 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 DEC1Q9P2X7 70 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 MSRAQ9UJ68 235 aa11.23□□□□□ -0.61
CHMP2B-201ENST00000263780 DENND4AQ7Z401 1863 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 MEGF11A6BM72 1044 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 C1orf196B1AJZ1 125 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 PQBP1O60828 265 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 TXNDC12O95881 172 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ACTL6AO96019 429 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 RENP00797 406 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 CD2P06729 351 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ZNF806P0C7X5 589 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ALOX5APP20292 161 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 CCKBRP32239 447 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 PNLIPRP2P54317 469 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 EIF5AP63241 154 aaKnown RBP11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 SMCO1Q147U7 214 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 ITPRIPL2Q3MIP1 535 aa11.22□□□□□ -0.61
CHMP2B-201ENST00000263780 PHF19Q5T6S3 580 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms