RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.73
TRAF4-202ENST00000262396 TAS2R5Q9NYW4 299 aa10.52□□□□□ -0.73
TRAF4-202ENST00000262396 GMEB1Q9Y692 573 aa10.52□□□□□ -0.73
TRAF4-202ENST00000262396 PLSCR5A0PG75 271 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 HMGB1P1B2RPK0 211 aaPredicted RBP10.51□□□□□ -0.73
TRAF4-202ENST00000262396 MSMBP08118 114 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 ITGA2P17301 1181 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 FUT1P19526 365 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 ACTG1P63261 375 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 CCL8P80075 99 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 GLO1Q04760 184 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 SELPLGQ14242 412 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 VMACQ2NL98 169 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 ELFN2Q5R3F8 820 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 CARM1Q86X55 608 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 TREML1Q86YW5 311 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 DPP10Q8N608 796 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 NOXO1Q8NFA2 376 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 GPR32P1Q8NGA4 272 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 OR1J1Q8NGS3 322 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF519Q8TB69 540 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 TSPEARQ8WU66 669 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 MCHR2Q969V1 340 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 RAB39BQ96DA2 213 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 MAGEB18Q96M61 343 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 LRRC37BQ96QE4 947 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF347Q96SE7 839 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 SIKE1Q9BRV8 207 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 RSPO3Q9BXY4 272 aaPredicted RBP10.51□□□□□ -0.73
TRAF4-202ENST00000262396 NANOGQ9H9S0 305 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 MYEF2Q9P2K5 600 aaKnown RBP10.51□□□□□ -0.73
TRAF4-202ENST00000262396 MED31Q9Y3C7 131 aa10.51□□□□□ -0.73
TRAF4-202ENST00000262396 ISPDA4D126 451 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 GMNCA6NCL1 334 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 C17orf100A8MU93 164 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 CLDN25C9JDP6 229 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 OR7A10O76100 309 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 CLPTM1O96005 669 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 MT-ND1P03886 318 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 PGA4P0DJD7 388 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 PGA3P0DJD8 388 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 TROVE2P10155 538 aaKnown RBP eCLIP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 MAGEB1P43366 347 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 GDI2P50395 445 aaKnown RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 UCP2P55851 309 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 MRPS11P82912 194 aaKnown RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 TOP3AQ13472 1001 aaPredicted RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 MAPRE2Q15555 327 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 FXNQ16595 210 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 TSTQ16762 297 aaKnown RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 HFEQ30201 348 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 TTMPQ5BVD1 217 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 AVPI1Q5T686 147 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 LRFN4Q6PJG9 635 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 LINC00114Q6XXX2 140 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 WDR88Q6ZMY6 472 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 HDXQ7Z353 690 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 PEG10Q86TG7 708 aaKnown RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 ALDH16A1Q8IZ83 802 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 CPEB3Q8NE35 698 aaKnown RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 FGFBP3Q8TAT2 258 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 NSMAFQ92636 917 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 RAB1CQ92928 201 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 TAMM41Q96BW9 452 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 RBP7Q96R05 134 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 KAT8Q9H7Z6 458 aaKnown RBP10.5□□□□□ -0.73
TRAF4-202ENST00000262396 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 SLC52A3Q9NQ40 469 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 MRGBPQ9NV56 204 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF224Q9NZL3 707 aa10.5□□□□□ -0.73
TRAF4-202ENST00000262396 MALRD1Q5VYJ5 2156 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 TRAV20A0A0B4J274 112 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 IGHV1-69-2A0A0G2JMI3 117 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 MGRN1O60291 552 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 SHOX2O60902 331 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-202ENST00000262396 TRMUO75648 421 aaKnown RBP10.49□□□□□ -0.73
TRAF4-202ENST00000262396 RGS9O75916 674 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-202ENST00000262396 GAAP10253 952 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ACADSP16219 412 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 AQP2P41181 271 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 RBM34P42696 430 aaKnown RBP10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF81P51508 661 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 RPL18Q07020 188 aaKnown RBP10.49□□□□□ -0.73
TRAF4-202ENST00000262396 MSMPQ1L6U9 139 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ZNF718Q3SXZ3 478 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 LRRC23Q53EV4 343 aaPredicted RBP10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ACSM5Q6NUN0 579 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ERICH5Q6P6B1 374 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ARL9Q6T311 187 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 USP51Q70EK9 711 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 WDFY1Q8IWB7 410 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 PFN4Q8NHR9 129 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 TMEM239Q8WW34 195 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 YIPF5Q969M3 257 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 ELMOD3Q96FG2 381 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 C1orf159Q96HA4 380 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 TPD52L3Q96J77 140 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 EGLN1Q9GZT9 426 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 GID8Q9NWU2 228 aa10.49□□□□□ -0.73
TRAF4-202ENST00000262396 RIMS3Q9UJD0 308 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms