RNA–Protein interactions for RNA: ENST00000261866.11

SPG11-201, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPG11, Length 7,774 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-201ENST00000261866 ZNF385BQ569K4 471 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 FAM71E1Q6IPT2 247 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 FAM198BQ6UWH4 519 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 RBM14Q96PK6 669 aaKnown RBP11.15□□□□□ -0.62
SPG11-201ENST00000261866 CLEC2DQ9UHP7 191 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 A8MVM7 634 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 H1FNTQ75WM6 255 aaPredicted RBP11.15□□□□□ -0.62
SPG11-201ENST00000261866 FOXRED1Q96CU9 486 aaPredicted RBP11.15□□□□□ -0.62
SPG11-201ENST00000261866 RNF170Q96K19 258 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 ZNF583Q96ND8 569 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 CDX2Q99626 313 aaPredicted RBP11.15□□□□□ -0.62
SPG11-201ENST00000261866 LRRC30A6NM36 301 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 FAM90A27PA6NNH2 459 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 CTDSP2O14595 271 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 DEGS1O15121 323 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 NKX3-1Q99801 234 aaPredicted RBP11.15□□□□□ -0.62
SPG11-201ENST00000261866 NIPAL2Q9H841 368 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 MED29Q9NX70 200 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 OR52A1Q9UKL2 312 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 PCYT1BQ9Y5K3 369 aaPredicted RBP11.15□□□□□ -0.62
SPG11-201ENST00000261866 A0A1B0GUL6 1792 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 GLI3P10071 1580 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 RAB5BP61020 215 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 SORDQ00796 357 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 TEKQ02763 1124 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 SMCO4Q9NRQ5 59 aa11.15□□□□□ -0.62
SPG11-201ENST00000261866 N4BP2Q86UW6 1770 aaPredicted RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 TCRBV3S1A0A5B6 114 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 EIF1BO60739 113 aaKnown RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 CLDN1O95832 211 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 HNRNPFP52597 415 aaKnown RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 ELAVL1Q15717 326 aaKnown RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 HIST2H3PS2Q5TEC6 136 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 TCTN3Q6NUS6 607 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 RPL22L1Q6P5R6 122 aaKnown RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 FBXL6Q8N531 539 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 BAHD1Q8TBE0 780 aaPredicted RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 NEURL3Q96EH8 262 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.63
SPG11-201ENST00000261866 PPA2Q9H2U2 334 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 A4GALTQ9NPC4 353 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 MTCH1Q9NZJ7 389 aa11.15□□□□□ -0.63
SPG11-201ENST00000261866 ZNF891A8MT65 544 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 EIF1P41567 113 aaKnown RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 EXOSC2Q13868 293 aaKnown RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 DUSP7Q16829 419 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 PDLIM3Q53GG5 364 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 METAP1DQ6UB28 335 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 PDZD9Q8IXQ8 264 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 UBTD2Q8WUN7 234 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 CSF3RQ99062 836 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 OSGIN1Q9UJX0 560 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 HOXD11P31277 338 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 GLYATL3Q5SZD4 288 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 PRRT1Q99946 306 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 DDX60LQ5H9U9 1706 aaKnown RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 OR5H15A6NDH6 313 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 OR5H14A6NHG9 310 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 OR5H1A6NKK0 313 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 KCNK2O95069 426 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 CRYZL1O95825 349 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 GLB1P16278 677 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 PIGAP37287 484 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 EIF2DP41214 584 aaKnown RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 CXorf67Q86X51 503 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 SUMF2Q8NBJ7 301 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 OR51E1Q8TCB6 317 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 KCNE4Q8WWG9 221 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 HPSE2Q8WWQ2 592 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 TRMT61AQ96FX7 289 aaKnown RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 SPIN2AQ99865 258 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 SPIN2BQ9BPZ2 258 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 OSGIN2Q9Y236 505 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 NUBP2Q9Y5Y2 271 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 NRAPQ86VF7 1730 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 RFPL3O75679 317 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 FCER1GP30273 86 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 CAPZBP47756 277 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 HSF1Q00613 529 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 BORAQ6PGQ7 559 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 GIMAP1Q8WWP7 306 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 MYH14Q7Z406 1995 aaKnown RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 UPK1BO75841 260 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 SPINK2P20155 84 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 PRKACBP22694 351 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 SNCAP37840 140 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 GLIPR1L1Q6UWM5 242 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 PRSS45Q7RTY3 260 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 LAX1Q8IWV1 398 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 REEP6Q96HR9 211 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 OR5M11Q96RB7 305 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 ING1Q9UK53 422 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 TGM6O95932 706 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 CELA2BP08218 269 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 PCSK6P29122 969 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 ZNF93P35789 620 aaPredicted RBP11.14□□□□□ -0.63
SPG11-201ENST00000261866 TAS2R31P59538 309 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 USP51Q70EK9 711 aa11.14□□□□□ -0.63
SPG11-201ENST00000261866 CCDC28AQ8IWP9 274 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms