RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TNFAIP8O95379 198 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 RENP00797 406 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 CCDC159P0C7I6 412 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 EDNRAP25101 427 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 NUDT6P53370 316 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 CSNK2BP67870 215 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 RUNX1T1Q06455 604 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 GID4Q8IVV7 300 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 WDFY1Q8IWB7 410 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 OR6X1Q8NH79 312 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 OR2M2Q96R28 347 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 HCAR1Q9BXC0 346 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 KCNJ16Q9NPI9 418 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 PRSS50Q9UI38 385 aa18.28■□□□□ 0.52
RTCA-201ENST00000260563 HELZ2Q9BYK8 2649 aaKnown RBP18.27■□□□□ 0.52
RTCA-201ENST00000260563 TENM4Q6N022 2769 aa18.27■□□□□ 0.52
RTCA-201ENST00000260563 USP9XQ93008 2570 aaPredicted RBP18.27■□□□□ 0.52
RTCA-201ENST00000260563 PRSS37A4D1T9 235 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 XPNPEP2O43895 674 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 FAM20BO75063 409 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 SLC43A1O75387 559 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 TRMUO75648 421 aaKnown RBP18.27■□□□□ 0.51
RTCA-201ENST00000260563 ZNF432O94892 652 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 CRHBPP24387 322 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 UBE2J2Q8N2K1 259 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 ZNF610Q8N9Z0 462 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 OR9Q1Q8NGQ5 310 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 RFKQ969G6 155 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 LRRC46Q96FV0 321 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 SLC25A44Q96H78 314 aaPredicted RBP18.27■□□□□ 0.51
RTCA-201ENST00000260563 KCNK17Q96T54 332 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 NMNAT2Q9BZQ4 307 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 SYT4Q9H2B2 425 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 AMBNQ9NP70 447 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 RPRD1BQ9NQG5 326 aaKnown RBP18.27■□□□□ 0.51
RTCA-201ENST00000260563 PLCXD1Q9NUJ7 323 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 SCN3BQ9NY72 215 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 VSX1Q9NZR4 365 aaPredicted RBP18.27■□□□□ 0.51
RTCA-201ENST00000260563 BLOC1S6Q9UL45 172 aa18.27■□□□□ 0.51
RTCA-201ENST00000260563 OR6C65A6NJZ3 312 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 A8MXE2 369 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 IGHV3-9P01782 118 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 SLC25A1P53007 311 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 CDH11P55287 796 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 CAMK2DQ13557 499 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 CARD17Q5XLA6 110 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 BEND4Q6ZU67 534 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 TMEM123Q8N131 208 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 POMGNT2Q8NAT1 580 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 OR51V1Q9H2C8 321 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 UPB1Q9UBR1 384 aa18.26■□□□□ 0.51
RTCA-201ENST00000260563 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.26■□□□□ 0.51
RTCA-201ENST00000260563 RPL36Q9Y3U8 105 aaKnown RBP18.26■□□□□ 0.51
RTCA-201ENST00000260563 SPTBN1Q01082 2364 aaKnown RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 SLC22A23A1A5C7 686 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 AHCYL1O43865 530 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 KRT33AO76009 404 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 CNOT4O95628 575 aaKnown RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 IGHG1P01857 330 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 GYPBP06028 91 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 LYNP07948 512 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 CLUP10909 449 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 SLC2A5P22732 501 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 KCTD21Q4G0X4 260 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 KLHL12Q53G59 568 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 TSPO2Q5TGU0 170 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 FBXW9Q5XUX1 488 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 ZNF474Q6S9Z5 364 aaPredicted RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 MEPCEQ7L2J0 689 aaKnown RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 ALKBH3Q96Q83 286 aaPredicted RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 ALG12Q9BV10 488 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 RBM24Q9BX46 236 aaKnown RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 MRPL13Q9BYD1 178 aaKnown RBP18.25■□□□□ 0.51
RTCA-201ENST00000260563 MALT1Q9UDY8 824 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 TPRKBQ9Y3C4 175 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 DOPEY1Q5JWR5 2465 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 ALPK2Q86TB3 2170 aa18.25■□□□□ 0.51
RTCA-201ENST00000260563 GCN1Q92616 2671 aaKnown RBP18.24■□□□□ 0.51
RTCA-201ENST00000260563 PGA4P0DJD7 388 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 PGA3P0DJD8 388 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 DBTP11182 482 aaKnown RBP18.24■□□□□ 0.51
RTCA-201ENST00000260563 SPI1P17947 270 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 HTR1FP30939 366 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 CLRN1P58418 232 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 RPS7P62081 194 aaKnown RBP18.24■□□□□ 0.51
RTCA-201ENST00000260563 ZNF91Q05481 1191 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 DBPQ10586 325 aaPredicted RBP18.24■□□□□ 0.51
RTCA-201ENST00000260563 APOFQ13790 326 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 FBXL19-AS1Q494R0 122 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 Q6ZT83 130 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 GPR137CQ8N3F9 429 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 SYT14Q8NB59 555 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 ZNF540Q8NDQ6 660 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 NOXO1Q8NFA2 376 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 OR2T4Q8NH00 348 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 ZNF696Q9H7X3 374 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 SLC7A10Q9NS82 523 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 ASB6Q9NWX5 421 aa18.24■□□□□ 0.51
RTCA-201ENST00000260563 MAGEA13PA6NCF6 341 aa18.23■□□□□ 0.51
RTCA-201ENST00000260563 SLC22A31A6NKX4 558 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms