RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 ZFP62Q8NB50 900 aaPredicted RBP15.56■□□□□ 0.08
SRSF1-201ENST00000258962 TXNDC15Q96J42 360 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 MED29Q9NX70 200 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 NPIPA1Q9UND3 350 aa15.56■□□□□ 0.08
SRSF1-201ENST00000258962 A6NIZ1 184 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 AQP7P3A6NL99 342 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 TFECO14948 347 aaPredicted RBP15.55■□□□□ 0.08
SRSF1-201ENST00000258962 OR2T7P0C7T2 308 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 UGT2B10P36537 528 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 RFC3P40938 356 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 RAP1BP61224 184 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 RAP1AP62834 184 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 H3F3AP84243 136 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 RBPJQ06330 500 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 TPBGQ13641 420 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 ZBTB46Q86UZ6 589 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 ZGRF1Q86YA3 2104 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 TIGD4Q8IY51 512 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 KBTBD8Q8NFY9 601 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 OR2T27Q8NH04 317 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 KLHL15Q96M94 604 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 TSPAN10Q9H1Z9 355 aaPredicted RBP15.55■□□□□ 0.08
SRSF1-201ENST00000258962 COPS3Q9UNS2 423 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 FKBP7Q9Y680 259 aa15.55■□□□□ 0.08
SRSF1-201ENST00000258962 IGLV1-36A0A0B4J1U3 117 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 H0YC42 278 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 ACOT7O00154 380 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 TRAF3IP2O43734 574 aaPredicted RBP15.54■□□□□ 0.08
SRSF1-201ENST00000258962 GPX5O75715 221 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 TRAPPC6AO75865 159 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 CAPZA2P47755 286 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 TDGF1P3P51864 188 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 RPS3AP61247 264 aaKnown RBP15.54■□□□□ 0.08
SRSF1-201ENST00000258962 RNFT1Q5M7Z0 435 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 FAM205BPQ63HN1 556 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 TMPRSS11AQ6ZMR5 421 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 GGNQ86UU5 652 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 ZFP41Q8N8Y5 198 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 ZHX1-C8orf76Q96EF9 292 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 SFXN2Q96NB2 322 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 KCNK17Q96T54 332 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 CHCHD6Q9BRQ6 235 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 CENPOQ9BU64 300 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 TTTY12Q9BZ98 90 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 RNF167Q9H6Y7 350 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 B9D1Q9UPM9 204 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 SF3B6Q9Y3B4 125 aaKnown RBP15.54■□□□□ 0.08
SRSF1-201ENST00000258962 NOX1Q9Y5S8 564 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 POLEQ07864 2286 aa15.54■□□□□ 0.08
SRSF1-201ENST00000258962 LOC102725191A0A1B0GVB3 256 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 TVP23AA6NH52 213 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 TNFSF11O14788 317 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 LRRTM2O43300 516 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 GPANK1O95872 356 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 HPNP05981 417 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 CELA3AP09093 270 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 CTLA4P16410 223 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 GFRA1P56159 465 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 CLDN20P56880 219 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 PPIAP62937 165 aaKnown RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 USP43Q70EL4 1123 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SLC16A9Q7RTY1 509 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SLC22A16Q86VW1 577 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 KLBQ86Z14 1044 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 UEVLDQ8IX04 471 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 UFD1Q92890 307 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 GPR137Q96N19 417 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 OXGR1Q96P68 337 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SRXN1Q9BYN0 137 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 TTTY10Q9BZA0 68 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 RERGLQ9H628 205 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 MARCH7Q9H992 704 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 KLHL13Q9P2N7 655 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 OSGIN2Q9Y236 505 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 BAHCC1Q9P281 2608 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 LOC100506127A0A0U1RQW1 187 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 PNMA8CA0A1B0GUJ8 204 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 GJE1A6NN92 205 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SEC14L5O43304 696 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 AKAP8O43823 692 aaKnown RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SLC16A7O60669 478 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 CLPXO76031 633 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 GLSO94925 669 aaPredicted RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 PSMA1P25786 263 aaKnown RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 CRYBB2P43320 205 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 BIDP55957 195 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 RPS25P62851 125 aaKnown RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 ETFDHQ16134 617 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 VASNQ6EMK4 673 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 TMEM225Q6GV28 225 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SIAH3Q8IW03 269 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 DYNC2LI1Q8TCX1 351 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 TRMT61AQ96FX7 289 aaKnown RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 C4orf36Q96KX1 117 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 EMC6Q9BV81 110 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 BABAM2Q9NXR7 383 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 B4GALT7Q9UBV7 327 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 KLHDC2Q9Y2U9 406 aa15.53■□□□□ 0.08
SRSF1-201ENST00000258962 SIRT4Q9Y6E7 314 aaPredicted RBP15.53■□□□□ 0.08
SRSF1-201ENST00000258962 IGHV3-15A0A0B4J1V0 119 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms