RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 SRSF6Q13247 344 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 BRICD5Q6PL45 260 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MAMSTRQ6ZN01 415 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 RNF144BQ7Z419 303 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ESX1Q8N693 406 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 AGBL5Q8NDL9 886 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 OR2T4Q8NH00 348 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 FRMD6Q96NE9 622 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 C1QTNF6Q9BXI9 259 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MFRPQ9BY79 579 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ATG5Q9H1Y0 275 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 HPF1Q9NWY4 346 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MRPL39Q9NYK5 338 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 MRM2Q9UI43 246 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 HSPB11Q9Y547 144 aa8.19□□□□□ -1.1
CKAP2-201ENST00000258607 ASH1LQ9NR48 2969 aaKnown RBP8.19□□□□□ -1.1
CKAP2-201ENST00000258607 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 INMT-MINDY4F8WBC2 141 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SLC33A1O00400 549 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ADAM10O14672 748 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DPM1O60762 260 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 IL1AP01583 271 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CLPSP04118 112 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SRMP19623 302 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SLC2A5P22732 501 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 F8A1P23610 371 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DCTDP32321 178 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 MPLP40238 635 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 TMEM69Q5SWH9 247 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 FAM69AQ5T7M9 428 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CDCP2Q5VXM1 449 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 C11orf88Q6PI97 169 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 C17orf107Q6ZR85 190 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CD163Q86VB7 1156 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SIAH3Q8IW03 269 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF101Q8IZC7 436 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 RNF113BQ8IZP6 322 aaKnown RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 BHLHE23Q8NDY6 225 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 RASL10BQ96S79 203 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 TIMP4Q99727 224 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SP140LQ9H930 580 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 FGF20Q9NP95 211 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 TAS2R5Q9NYW4 299 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 FRRS1LQ9P0K9 344 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 EPHA6Q9UF33 1036 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DKKL1Q9UK85 242 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 A0A096LPE4 126 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 A0A1W2PPZ6 126 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SAGE2PA6NJ88 616 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CENPXA8MT69 81 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 TNFSF11O14788 317 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SDHAP31040 664 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DIO1P49895 249 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 PUDPQ08623 228 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 MRPL28Q13084 256 aaKnown RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CDK5R1Q15078 307 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 MANEAQ5SRI9 462 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 FAM205BPQ63HN1 556 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 PMS2CLQ68D20 193 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DPY19L2P2Q6ZN68 376 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ABHD12BQ7Z5M8 362 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SLC22A4Q9H015 551 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 BANF2Q9H503 90 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 MYOTQ9UBF9 498 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 POLHQ9Y253 713 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 A0A1B0GTQ1 180 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 TRDV1A0A1B0GX56 115 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 LNP1A1A4G5 178 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF726A6NNF4 738 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 H3BMH7 237 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 M0QYG6 137 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 PPM1BO75688 479 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 STK17BO94768 372 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 IGKV3-11P04433 115 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DBHP09172 617 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 H2BFMP0C1H6 154 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ABOP16442 354 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF43P17038 809 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 DPP4P27487 766 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 HSD11B1P28845 292 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 GUCA1AP43080 201 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 PRPS1P60891 318 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 INSM1Q01101 510 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF141Q15928 474 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 IGFBP7Q16270 282 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 WDR38Q5JTN6 314 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 WIPI1Q5MNZ9 446 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CMTM4Q8IZR5 234 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 OR52B4Q8NGK2 314 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 OR52I2Q8NH67 350 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 OR14A16Q8NHC5 309 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 UPRTQ96BW1 309 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ZNF837Q96EG3 531 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 SLC25A44Q96H78 314 aaPredicted RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CACNG6Q9BXT2 260 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 COMMD4Q9H0A8 199 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 NRIP3Q9NQ35 241 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 TAS2R4Q9NYW5 299 aa8.18□□□□□ -1.1
CKAP2-201ENST00000258607 CCDC59Q9P031 241 aaKnown RBP8.18□□□□□ -1.1
CKAP2-201ENST00000258607 ALG5Q9Y673 324 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms