RNA–Protein interactions for RNA: ENST00000257264.3

TCN1-201, Transcript of transcobalamin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCN1, Length 1,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN1-201ENST00000257264 NXF5Q9H1B4 397 aaKnown RBP4.35□□□□□ -1.71
TCN1-201ENST00000257264 AGPAT4Q9NRZ5 378 aa4.35□□□□□ -1.71
TCN1-201ENST00000257264 IL36GQ9NZH8 169 aa4.35□□□□□ -1.71
TCN1-201ENST00000257264 AP3M1Q9Y2T2 418 aa4.35□□□□□ -1.71
TCN1-201ENST00000257264 EXOSC1Q9Y3B2 195 aaKnown RBP4.35□□□□□ -1.71
TCN1-201ENST00000257264 FADS3Q9Y5Q0 445 aa4.35□□□□□ -1.71
TCN1-201ENST00000257264 COL4A4P53420 1690 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 TANC1Q9C0D5 1861 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 NYNRINQ9P2P1 1898 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 MYO16Q9Y6X6 1858 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ANKRD36A6QL64 1941 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 MYLKQ15746 1914 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 LOC285095A0A1B0GVY8 99 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 GABRR3A8MPY1 467 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 NME4O00746 187 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 UBFD1O14562 309 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 PRKNO60260 465 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 E2F6O75461 281 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 EEDO75530 441 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 SEC24AO95486 1093 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 TRBC1P01850 177 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ERCC1P07992 297 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 CELA2AP08217 269 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ALOX5P09917 674 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ATP1B2P14415 290 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 ATP6V1B2P21281 511 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 HTR1EP28566 365 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 EPHX2P34913 555 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ID1P41134 155 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SOX3P41225 446 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 BDKRB1P46663 353 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 RPS9P46781 194 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 EMDP50402 254 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 NOVA1P51513 510 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 BCAP31P51572 246 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 POLR2JP52435 117 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 STC1P52823 247 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 TMBIM6P55061 237 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 CDKN2DP55273 166 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 PLP1P60201 277 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ACVR1Q04771 509 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 VPS26BQ4G0F5 336 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ATP6AP1LQ52LC2 224 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 RBM48Q5RL73 367 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 SLC25A47Q6Q0C1 308 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 UQCC3Q6UW78 93 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SCD5Q86SK9 330 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SERPINA9Q86WD7 417 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 FUNDC1Q8IVP5 155 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ZNF843Q8N446 348 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ZNF555Q8NEP9 628 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 OR7G2Q8NG99 324 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 OR4K14Q8NGD5 310 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 OR6F1Q8NGZ6 308 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 CNIH3Q8TBE1 160 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 FNDC8Q8TC99 324 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 MAGEE2Q8TD90 523 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 BLOC1S5Q8TDH9 187 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SCARB1Q8WTV0 552 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ZNRF4Q8WWF5 429 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ZNF707Q96C28 371 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 C12orf43Q96C57 262 aaKnown RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 ST6GAL2Q96JF0 529 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 BTN2A3PQ96KV6 586 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ZNF599Q96NL3 588 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SLC29A1Q99808 456 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 C1orf50Q9BV19 199 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 UGT2B28Q9BY64 529 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SLC7A5P2Q9GIP4 190 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ING2Q9H160 280 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 Q9HAA7 133 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 CXorf21Q9HAI6 301 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 GALPQ9UBC7 116 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 UXTQ9UBK9 157 aaPredicted RBP4.34□□□□□ -1.71
TCN1-201ENST00000257264 NEU3Q9UQ49 428 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 SCML2Q9UQR0 700 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 ORC6Q9Y5N6 252 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 DNAJC15Q9Y5T4 150 aa4.34□□□□□ -1.71
TCN1-201ENST00000257264 TDRD15B5MCY1 1934 aaKnown RBP4.34□□□□□ -1.72
TCN1-201ENST00000257264 PTPRDP23468 1912 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 TRBV11-1A0A0K0K1C0 115 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 A0A1W2PPE3 182 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 FRG2CA6NGY1 282 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 GLTPD2A6NH11 291 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 K7ERQ8 282 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 SURF4O15260 269 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 TAPBPO15533 448 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 TPST1O60507 370 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 CDK14O94921 469 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 OR2F2O95006 317 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 WISP3O95389 354 aaPredicted RBP4.33□□□□□ -1.72
TCN1-201ENST00000257264 PAK4O96013 591 aaPredicted RBP4.33□□□□□ -1.72
TCN1-201ENST00000257264 HBQ1P09105 142 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 LINC00032P0C843 101 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 STAG3L2P0CL84 134 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 CD1EP15812 388 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 TUBG1P23258 451 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 DCKP27707 260 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 PPP2R1BP30154 601 aa4.33□□□□□ -1.72
TCN1-201ENST00000257264 OR1E1P30953 314 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms