RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 PDFQ9HBH1 243 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 LRTM1Q9HBL6 345 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 GPR173Q9NS66 373 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 GNG8Q9UK08 70 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 A4GNTQ9UNA3 340 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 RCE1Q9Y256 329 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 ENPP4Q9Y6X5 453 aa10.79□□□□□ -0.68
CCNA1-201ENST00000255465 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PRAMEF11O60813 436 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 DFFBO76075 338 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 LIMS3P0CW19 117 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 LIMS4P0CW20 117 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 RABIFP47224 123 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SRSF3P84103 164 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 CST6Q15828 149 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 LPAL2Q16609 132 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 MST1LQ2TV78 715 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 UBE2NLQ5JXB2 153 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 HENMT1Q5T8I9 393 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 ZDHHC20Q5W0Z9 365 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 FAM219BQ5XKK7 198 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 C18orf63Q68DL7 685 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 AWAT2Q6E213 333 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SLC35D2Q76EJ3 337 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 CXXC5Q7LFL8 322 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 C5orf24Q7Z6I8 188 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SLC30A8Q8IWU4 369 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 RYBPQ8N488 228 aaPredicted RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 LINC00471Q8N535 108 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 OR4C6Q8NH72 309 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SNIP1Q8TAD8 396 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PAQR8Q8TEZ7 354 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 FGF11Q92914 225 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 WNT2BQ93097 391 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 GTPBP3Q969Y2 492 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 WDR89Q96FK6 387 aaPredicted RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 AARSD1Q9BTE6 412 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SLC6A16Q9GZN6 736 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 C1orf198Q9H425 327 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 RERGLQ9H628 205 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PTGFRNQ9P2B2 879 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 GALPQ9UBC7 116 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 DYRK1BQ9Y463 629 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 TRAV1-2A0A0B4J238 106 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 A0A0G2JK05 382 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 UNC119BA6NIH7 251 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 TMEM229AB2RXF0 380 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 TMEM238C9JI98 176 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 F5H0A9 414 aaPredicted RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 FAAHO00519 579 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PHOX2AO14813 284 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 CNOT4O95628 575 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 IGLV3-19P01714 112 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PRPH2P23942 346 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 MAPK9P45984 424 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SMIM11AP58511 58 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 EGR3Q06889 387 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 TSPAN31Q12999 210 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 AWAT1Q58HT5 328 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 MRNIPQ6NTE8 343 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PSAPL1Q6NUJ1 521 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 ZNF529Q6P280 563 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 ENPP7Q6UWV6 458 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 APOOLQ6UXV4 268 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 ASCL5Q7RTU5 278 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 TMPRSS11BQ86T26 416 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 FAM185AQ8N0U4 392 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 BEST3Q8N1M1 668 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 TCEANCQ8N8B7 351 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 NPRL2Q8WTW4 380 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 FCAMRQ8WWV6 532 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 PIK3IP1Q96FE7 263 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 KIRREL1Q96J84 757 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 C5orf34Q96MH7 638 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 OR2M4Q96R27 311 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 CNN2Q99439 309 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 STACQ99469 402 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SULT4A1Q9BR01 284 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 URM1Q9BTM9 101 aaKnown RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 WDR13Q9H1Z4 485 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 CHST8Q9H2A9 424 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 RGCCQ9H4X1 137 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 KIR3DX1Q9H7L2 352 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 GPATCH2Q9NW75 528 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 WSB2Q9NYS7 404 aaPredicted RBP10.78□□□□□ -0.68
CCNA1-201ENST00000255465 SERGEFQ9UGK8 458 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 ZFP30Q9Y2G7 519 aa10.78□□□□□ -0.68
CCNA1-201ENST00000255465 OTOGLQ3ZCN5 2332 aa10.77□□□□□ -0.68
CCNA1-201ENST00000255465 SLC5A10A0PJK1 596 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 MAGEB17A8MXT2 336 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 SCAMP2O15127 329 aaKnown RBP10.77□□□□□ -0.69
CCNA1-201ENST00000255465 RNF13O43567 381 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 GPRIN2O60269 458 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 ADH1BP00325 375 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 GASTP01350 101 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 CTSLP07711 333 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 CHRM4P08173 479 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 HSD3B1P14060 373 aa10.77□□□□□ -0.69
CCNA1-201ENST00000255465 SDC1P18827 310 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms