RNA–Protein interactions for RNA: ENST00000252211.6

ZKSCAN3-201, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZKSCAN3, Length 4,725 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-201ENST00000252211 SNAPC3Q92966 411 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SPIN2AQ99865 258 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SPIN2BQ9BPZ2 258 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 CENPOQ9BU64 300 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 GALNT9Q9HCQ5 603 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 EMC7Q9NPA0 242 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 UNC13CQ8NB66 2214 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SMCO3A2RU48 225 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TNFSF11O14788 317 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TK1P04183 234 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SLC2A1P11166 492 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 HOXB3P14651 431 aaPredicted RBP11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SNRPGP62308 76 aaKnown RBP11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 BDH1Q02338 343 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR5D18Q8NGL1 313 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ABHD4Q8TB40 342 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TIMD4Q96H15 378 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MED29Q9NX70 200 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 IFNA7P01567 189 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 FGFBP1Q14512 234 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SLC22A25Q6T423 547 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 AMER3Q8N944 861 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR52N1Q8NH53 320 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF431Q8TF32 576 aaPredicted RBP11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 NICN1Q9BSH3 213 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TXNIPQ9H3M7 391 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MAN2C1Q9NTJ4 1040 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZFP57Q9NU63 452 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ATP23Q9Y6H3 246 aa11.11□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF701M0R085 212 aaPredicted RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SELENOFO60613 162 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TSPAN9O75954 239 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SBK2P0C263 348 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 PRR35P0CG20 571 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF26P17031 533 aaPredicted RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR8B8Q15620 311 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 BHLHE23Q8NDY6 225 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR6F1Q8NGZ6 308 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 PHYHIPQ92561 330 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 INTS12Q96CB8 462 aaKnown RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 GNG12Q9UBI6 72 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MED16Q9Y2X0 877 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 IGHV5-10-1A0A0J9YXX1 117 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 NAP1L6A6NFF2 107 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 GREM1O60565 184 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 HIST1H1CP16403 213 aaKnown RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SELEP16581 610 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 EIF2S3P41091 472 aaKnown RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MEF2DQ14814 521 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 GSG1LQ6UXU4 331 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 RNF165Q6ZSG1 346 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SLC22A24Q8N4F4 322 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 C22orf15Q8WYQ4 148 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 CITED4Q96RK1 184 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 PLAC1Q9HBJ0 212 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 NLKQ9UBE8 527 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TRAPPC2LQ9UL33 140 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MRPS28Q9Y2Q9 187 aaKnown RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ARFGEF1Q9Y6D6 1849 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 NKX6-3A6NJ46 265 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 H3BMQ9 156 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 EML2O95834 649 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 CDK2P24941 298 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 HTR2CP28335 458 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 KIAA0040Q15053 153 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF695Q8IW36 515 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 BEST3Q8N1M1 668 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR4C3Q8NH37 302 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 NDNFQ8TB73 568 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF471Q9BX82 626 aaPredicted RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF286AQ9HBT8 521 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 NRIP3Q9NQ35 241 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF224Q9NZL3 707 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 CACNA1EQ15878 2313 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 EMP3P54852 163 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 RELAQ04206 551 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 YIF1BQ5BJH7 314 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SLC46A3Q7Z3Q1 461 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 CENPSQ8N2Z9 138 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ACBD4Q8NC06 268 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR5M9Q8NGP3 310 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 FGGYQ96C11 551 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 KCTD12Q96CX2 325 aaKnown RBP11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 PCDHGA3Q9Y5H0 932 aa11.1□□□□□ -0.63
ZKSCAN3-201ENST00000252211 DHHO43323 396 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZNF254O75437 659 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 SEC14L2O76054 403 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 LAP3P28838 519 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MEOX1P50221 254 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ZIC1Q15915 447 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 BCDIN3DQ7Z5W3 292 aaKnown RBP11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 TMEM99Q8N816 258 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 OR52I1Q8NGK6 324 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 ROBO4Q8WZ75 1007 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 KISS1RQ969F8 398 aaPredicted RBP11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 MUL1Q969V5 352 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 GNRHR2Q96P88 292 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 PRRT1Q99946 306 aa11.09□□□□□ -0.63
ZKSCAN3-201ENST00000252211 A0A096LPE4 126 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms