RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 POLR2J3Q9H1A7 115 aaKnown RBP18.07■□□□□ 0.48
NEDD8-201ENST00000250495 LRMDAQ9H2I8 198 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 CDH20Q9HBT6 801 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MRGBPQ9NV56 204 aa18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MYEF2Q9P2K5 600 aaKnown RBP18.07■□□□□ 0.48
NEDD8-201ENST00000250495 MCIDASD6RGH6 385 aa18.06■□□□□ 0.48
NEDD8-201ENST00000250495 RBM34P42696 430 aaKnown RBP18.06■□□□□ 0.48
NEDD8-201ENST00000250495 TAS2R41P59536 307 aa18.06■□□□□ 0.48
NEDD8-201ENST00000250495 PLP2Q04941 152 aa18.06■□□□□ 0.48
NEDD8-201ENST00000250495 CCNIQ14094 377 aa18.06■□□□□ 0.48
NEDD8-201ENST00000250495 CARM1Q86X55 608 aa18.06■□□□□ 0.48
NEDD8-201ENST00000250495 MRPL13Q9BYD1 178 aaKnown RBP18.06■□□□□ 0.48
NEDD8-201ENST00000250495 STX18Q9P2W9 335 aaKnown RBP18.06■□□□□ 0.48
NEDD8-201ENST00000250495 IQCMA0A1B0GVH7 501 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 EBAG9O00559 213 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 FBP2O00757 339 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 NPPAP01160 153 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 IGF2P01344 180 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 IFNA14P01570 189 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 F13BP05160 661 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 FAM157BP0CG42 384 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 NAT2P11245 290 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 RAD52P43351 418 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 CRYBA2P53672 197 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 SRSF2Q01130 221 aaKnown RBP18.05■□□□□ 0.48
NEDD8-201ENST00000250495 RPL18Q07020 188 aaKnown RBP18.05■□□□□ 0.48
NEDD8-201ENST00000250495 NKPD1Q17RQ9 610 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 TBC1D28Q2M2D7 210 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 NKAIN4Q8IVV8 208 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 OR8J3Q8NGG0 315 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 SYNPRQ8TBG9 265 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 C11orf40Q8WZ69 217 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 LRRC58Q96CX6 371 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 SGTBQ96EQ0 304 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF347Q96SE7 839 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 NSRP1Q9H0G5 558 aaKnown RBP18.05■□□□□ 0.48
NEDD8-201ENST00000250495 KCNN2Q9H2S1 579 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 INIPQ9NRY2 104 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 TAAR3PQ9P1P4 343 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 RIMS3Q9UJD0 308 aa18.05■□□□□ 0.48
NEDD8-201ENST00000250495 TCF21O43680 179 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 OR7A10O76100 309 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 OR5F1O95221 314 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 SNAP29O95721 258 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 LCKP06239 509 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 CCL2P13500 99 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF250P15622 560 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ACADSP16219 412 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 DRD4P21917 467 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 DAP3P51398 398 aaKnown RBP18.04■□□□□ 0.48
NEDD8-201ENST00000250495 UGT2B15P54855 530 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 KLF3P57682 345 aaPredicted RBP18.04■□□□□ 0.48
NEDD8-201ENST00000250495 MYBPC1Q00872 1141 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 MOGQ16653 247 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 MMEL1Q495T6 779 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 RABL3Q5HYI8 236 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 COQ5Q5HYK3 327 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ERICH5Q6P6B1 374 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 GLCCI1Q86VQ1 547 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 CALHM3Q86XJ0 350 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 SYT14Q8NB59 555 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 RBM15BQ8NDT2 890 aaKnown RBP18.04■□□□□ 0.48
NEDD8-201ENST00000250495 NOXO1Q8NFA2 376 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 CLDND2Q8NHS1 167 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF519Q8TB69 540 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 TMEM239Q8WW34 195 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ASB10Q8WXI3 467 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF416Q9BWM5 594 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 BCL2L14Q9BZR8 327 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF275Q9NSD4 429 aaPredicted RBP18.04■□□□□ 0.48
NEDD8-201ENST00000250495 SLCO1C1Q9NYB5 712 aa18.04■□□□□ 0.48
NEDD8-201ENST00000250495 IGLV3-9A0A075B6K5 115 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 PPIHO43447 177 aaKnown RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 TRMUO75648 421 aaKnown RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 CLPTM1O96005 669 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 TFP02787 698 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 SAGP10523 405 aaPredicted RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 AQP2P41181 271 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 ZNF133P52736 654 aaPredicted RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 UCP2P55851 309 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 RUNX1T1Q06455 604 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 PIN1Q13526 163 aaPredicted RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 TMEM154Q6P9G4 183 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 DEF8Q6ZN54 512 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 PAQR4Q8N4S7 273 aaPredicted RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 PFN4Q8NHR9 129 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 TMEM255BQ8WV15 326 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 SNX33Q8WV41 574 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 LIPHQ8WWY8 451 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 YIPF5Q969M3 257 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 SEPHS2Q99611 448 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 TMEM120AQ9BXJ8 343 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 FAM107BQ9H098 131 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 RACGAP1Q9H0H5 632 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 SIAEQ9HAT2 523 aa18.03■□□□□ 0.48
NEDD8-201ENST00000250495 HINT3Q9NQE9 182 aaKnown RBP18.03■□□□□ 0.48
NEDD8-201ENST00000250495 C17orf100A8MU93 164 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 THRBP10828 461 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 APLNRP35414 380 aa18.02■□□□□ 0.48
NEDD8-201ENST00000250495 HSF2Q03933 536 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms