RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 CBLN2Q8IUK8 224 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 EIF4E3Q8N5X7 224 aaKnown RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 OR4K14Q8NGD5 310 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 PHYHIPQ92561 330 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ZNF764Q96H86 408 aaPredicted RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ADAT1Q9BUB4 502 aaKnown RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 POFUT1Q9H488 388 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 KCNK6Q9Y257 313 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 TRBV23-1A0A0A0MS06 115 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 TMEM72A0PK05 275 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 OR5H14A6NHG9 310 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ZFPL1O95159 310 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ZIC2O95409 532 aaPredicted RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 KNG1P01042 644 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 CALCBP10092 127 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ARL3P36405 182 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 RPS15P62841 145 aaKnown RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 FABP9Q0Z7S8 132 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 VAMP3Q15836 100 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 STAC2Q6ZMT1 411 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 PGAP1Q75T13 922 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 SLC35F3Q8IY50 421 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ZNF619Q8N2I2 560 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 OR4D6Q8NGJ1 314 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ZNF75AQ96N20 296 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 PRDM7Q9NQW5 492 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ZNF629Q9UEG4 869 aaPredicted RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ADAM18Q9Y3Q7 739 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 BRCA2P51587 3418 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 MPTX1A8MV57 137 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 H7C417 338 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 EIF1AYO14602 144 aaKnown RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 CD3DP04234 171 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 OR8G3PP0DMU2 310 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 RNH1P13489 461 aaKnown RBP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 RAB28P51157 221 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 FABP6P51161 128 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 CAV2P51636 162 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 ALKBH2Q6NS38 261 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 SLC22A25Q6T423 547 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.05
SRSF6-201ENST00000244020 TMPRSS11FQ6ZWK6 438 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 LINC01555Q8NAE3 123 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 CHST6Q9GZX3 395 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 APMAPQ9HDC9 416 aa8.47□□□□□ -1.05
SRSF6-201ENST00000244020 A0A1W2PQ45 241 aaPredicted RBP8.46□□□□□ -1.05
SRSF6-201ENST00000244020 A0A1W2PQY0 241 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 PIN1P1O15428 100 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 NDUFB2O95178 105 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 RAB3DO95716 219 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 CD80P33681 288 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 DUSP8Q13202 625 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 SNTB1Q13884 538 aaKnown RBP8.46□□□□□ -1.05
SRSF6-201ENST00000244020 OR10K2Q6IF99 312 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 TMEM205Q6UW68 189 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 OR51D1Q8NGF3 324 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 WNT2BQ93097 391 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 CCDC74AQ96AQ1 378 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 LINC00615Q96LM1 132 aaPredicted RBP8.46□□□□□ -1.05
SRSF6-201ENST00000244020 HCFC1R1Q9NWW0 138 aa8.46□□□□□ -1.05
SRSF6-201ENST00000244020 TP53BP1Q12888 1972 aaPredicted RBP8.46□□□□□ -1.05
SRSF6-201ENST00000244020 TMEM82A0PJX8 343 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 RAD1O60671 282 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 GABRA3P34903 492 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 PPP2CBP62714 309 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 PPP2CAP67775 309 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 EIF2B1Q14232 305 aaKnown RBP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 STEAP1BQ6NZ63 245 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 NDUFAF7Q7L592 441 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 DND1Q8IYX4 353 aaKnown RBP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 OR10D4PQ8NGN7 298 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 NPRL2Q8WTW4 380 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 MALSU1Q96EH3 234 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 LMLNQ96KR4 655 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 PBX4Q9BYU1 374 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 EXOSC3Q9NQT5 275 aaKnown RBP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 RXFP3Q9NSD7 469 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 C19orf12Q9NSK7 152 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 RASL12Q9NYN1 266 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 HAO2Q9NYQ3 351 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 PCDHB10Q9UN67 800 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 SCN3AQ9NY46 2000 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 ANKUB1A6NFN9 424 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 CCSO14618 274 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 TGM5O43548 720 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 GLSO94925 669 aaPredicted RBP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 CST5P28325 142 aaPredicted RBP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 SLC26A5P58743 744 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 RPS11P62280 158 aaKnown RBP eCLIP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 Q499Y3 187 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 DEFB134Q4QY38 66 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 TRMT12Q53H54 448 aaKnown RBP8.46□□□□□ -1.06
SRSF6-201ENST00000244020 SOHLH1Q5JUK2 328 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 MANEAQ5SRI9 462 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 CST9LP1Q5W188 147 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 OR2W3Q7Z3T1 314 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 CD163Q86VB7 1156 aa8.46□□□□□ -1.06
SRSF6-201ENST00000244020 ZNF679Q8IYX0 411 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms