RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SLC25A47Q6Q0C1 308 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 ADCK1Q86TW2 530 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 OR1K1Q8NGR3 316 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 MUS81Q96NY9 551 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 FOXN4Q96NZ1 517 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 WFIKKN1Q96NZ8 548 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 DDOQ99489 341 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 NUAK2Q9H093 628 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 SLC25A19Q9HC21 320 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 SRA1Q9HD15 236 aaKnown RBP13.17□□□□□ -0.3
RPA3-201ENST00000223129 RPRD1BQ9NQG5 326 aaKnown RBP13.17□□□□□ -0.3
RPA3-201ENST00000223129 VSX1Q9NZR4 365 aaPredicted RBP13.17□□□□□ -0.3
RPA3-201ENST00000223129 ORC6Q9Y5N6 252 aa13.17□□□□□ -0.3
RPA3-201ENST00000223129 SPTAN1Q13813 2472 aaKnown RBP13.16□□□□□ -0.3
RPA3-201ENST00000223129 DCTN6O00399 190 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 SLC16A7O60669 478 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 SNAP29O95721 258 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 CTLA4P16410 223 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 PAX7P23759 505 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 CDAP32320 146 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 GRK5P34947 590 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 ZNF133P52736 654 aaPredicted RBP13.16□□□□□ -0.3
RPA3-201ENST00000223129 TGFBR3Q03167 851 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 CRMP1Q14194 572 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 SP5Q6BEB4 398 aaPredicted RBP13.16□□□□□ -0.3
RPA3-201ENST00000223129 ALKBH2Q6NS38 261 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 SLC37A3Q8NCC5 494 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 ZC3HAV1LQ96H79 300 aaKnown RBP13.16□□□□□ -0.3
RPA3-201ENST00000223129 FOXB1Q99853 325 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 GABARAPL3Q9BY60 117 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 TVP23BQ9NYZ1 205 aa13.16□□□□□ -0.3
RPA3-201ENST00000223129 PRR14LQ5THK1 2151 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 TUBAL3A6NHL2 446 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 ZAR1LA6NP61 321 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 RENP00797 406 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 B4GALT1P15291 398 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 PCYT1AP49585 367 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 RAD23AP54725 363 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 SORDQ00796 357 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 C10orf128Q5T292 105 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 OGFRL1Q5TC84 451 aaPredicted RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 OR6V1Q8N148 313 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 STEAP2Q8NFT2 490 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 FNDC8Q8TC99 324 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 NRG4Q8WWG1 115 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 BCL2L2Q92843 193 aaPredicted RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 TOR3AQ9H497 397 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 CMC2Q9NRP2 79 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 ENOPH1Q9UHY7 261 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 KLHL21Q9UJP4 597 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 UGT2A1Q9Y4X1 527 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 USP9YO00507 2555 aaPredicted RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 A6NHS1 94 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 FAM183AA6NL82 134 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 FAM171A2A8MVW0 826 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 M0R129 80 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 SURF4O15260 269 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 AHCYL1O43865 530 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 GPANK1O95872 356 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 IGFBP2P18065 325 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 PTDSS1P48651 473 aaKnown RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 TBRG1Q3YBR2 411 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 OTPQ5XKR4 325 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 OR7E24Q6IFN5 339 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 KLHL24Q6TFL4 600 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 MEX3BQ6ZN04 569 aaKnown RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 ZNF813Q6ZN06 617 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 DMRTC2Q8IXT2 367 aaPredicted RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 OR52N5Q8NH56 324 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 MBOAT4Q96T53 435 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 MED20Q9H944 212 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 SEC61A2Q9H9S3 476 aa13.15□□□□□ -0.3
RPA3-201ENST00000223129 COA3Q9Y2R0 106 aaPredicted RBP13.15□□□□□ -0.3
RPA3-201ENST00000223129 OR5H1A6NKK0 313 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 RIIAD1A6NNX1 92 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 DLGAP1O14490 977 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 HMGN1P05114 100 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 CLUP10909 449 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 NR2C1P13056 603 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 ZNF84P51523 738 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 TUBA1BP68363 451 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 TUBA4AP68366 448 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 TAB1Q15750 504 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 SNAPC1Q16533 368 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 SLX4IPQ5VYV7 408 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 ANKRD16Q6P6B7 361 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 TUBA1AQ71U36 451 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 WDR31Q8NA23 367 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 OR9Q1Q8NGQ5 310 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 ZNRF4Q8WWF5 429 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 OTULINQ96BN8 352 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 SNX18Q96RF0 628 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 MED18Q9BUE0 208 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 HCAR1Q9BXC0 346 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 TMEM38BQ9NVV0 291 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 CRIM1Q9NZV1 1036 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 PLEKHB1Q9UF11 243 aaPredicted RBP13.14□□□□□ -0.31
RPA3-201ENST00000223129 NDRG3Q9UGV2 375 aa13.14□□□□□ -0.31
RPA3-201ENST00000223129 B9D1Q9UPM9 204 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms