RNA–Protein interactions for RNA: ENST00000216085.11

RHBDD3-201, Transcript of rhomboid domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDD3, Length 1,794 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-201ENST00000216085 OR1K1Q8NGR3 316 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 NSMAFQ92636 917 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 RASSF4Q9H2L5 321 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 RERGLQ9H628 205 aa17.75■□□□□ 0.43
RHBDD3-201ENST00000216085 TUBAL3A6NHL2 446 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ZAR1LA6NP61 321 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 SLC16A7O60669 478 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 KHDRBS3O75525 346 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 FARS2O95363 451 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 SNAPC1Q16533 368 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 C1QTNF12Q5T7M4 302 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 SLX4IPQ5VYV7 408 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 TMEM236Q5W0B7 351 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ACSM5Q6NUN0 579 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 SLC37A3Q8NCC5 494 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 OR2T4Q8NH00 348 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 MED18Q9BUE0 208 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 RPRD1BQ9NQG5 326 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 NPDC1Q9NQX5 325 aaPredicted RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 TVP23BQ9NYZ1 205 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ANKHD1Q8IWZ3 2542 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 COL12A1Q99715 3063 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 A1L4Q6 167 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 SURF4O15260 269 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 NPR2P20594 1047 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 CDC42P60953 191 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 UBE2NP61088 152 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ARF1P84077 181 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ZIK1Q3SY52 487 aaPredicted RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 NRN1LQ496H8 165 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ZNF813Q6ZN06 617 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 CCDC36Q8IYA8 594 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 ZNF555Q8NEP9 628 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 S100PBPQ96BU1 408 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 NMD3Q96D46 503 aaKnown RBP17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 MUCL1Q96DR8 90 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 MUS81Q96NY9 551 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 TOR3AQ9H497 397 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 FKBP7Q9Y680 259 aa17.74■□□□□ 0.43
RHBDD3-201ENST00000216085 HOXB1P14653 301 aaPredicted RBP17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 PAX7P23759 505 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 GRNP28799 593 aaKnown RBP17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 CCKARP32238 428 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 FOXG1P55316 489 aaPredicted RBP17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 CRMP1Q14194 572 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 TSC22D1Q15714 1073 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 GABRA6Q16445 453 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 TIMM23BQ5SRD1 257 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 SLC25A47Q6Q0C1 308 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 CYB561A3Q8NBI2 242 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 NPEPL1Q8NDH3 523 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 NANOS1Q8WY41 292 aaKnown RBP17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 HSD17B8Q92506 261 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 OTULINQ96BN8 352 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 NUAK2Q9H093 628 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 RACGAP1Q9H0H5 632 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 MOV10Q9HCE1 1003 aaKnown RBP17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 OBP2BQ9NPH6 170 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 TMEM38BQ9NVV0 291 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 IMPAD1Q9NX62 359 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 AMDHD2Q9Y303 409 aa17.73■□□□□ 0.43
RHBDD3-201ENST00000216085 USP9YO00507 2555 aaPredicted RBP17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 A0A1W2PPL8 197 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 OR5H1A6NKK0 313 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 PRR23D1E9PI22 279 aaPredicted RBP17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 SNAP29O95721 258 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 PRR23D2P0DMB1 279 aaPredicted RBP17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 OR8G3PP0DMU2 310 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 B4GALT1P15291 398 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 CTLA4P16410 223 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 GLO1Q04760 184 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 ZNF627Q7L945 461 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 PROKR2Q8NFJ6 384 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 ZNF837Q96EG3 531 aaPredicted RBP17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 BOD1Q96IK1 185 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 GRIP2Q9C0E4 1043 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 KCNN2Q9H2S1 579 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 FN3KQ9H479 309 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 SEC61A2Q9H9S3 476 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 ZNF226Q9NYT6 803 aa17.72■□□□□ 0.43
RHBDD3-201ENST00000216085 OR6C68A6NDL8 312 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 WNT11O96014 354 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 EPHA2P29317 976 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 CENPAP49450 140 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 SLC25A1P53007 311 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 MRPS34P82930 218 aaKnown RBP17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 TBRG1Q3YBR2 411 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 C12orf73Q69YU5 71 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 GLB1L2Q8IW92 636 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 NELFAQ9H3P2 528 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 SRA1Q9HD15 236 aaKnown RBP17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 NGBQ9NPG2 151 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 GMPPBQ9Y5P6 360 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 ADGRG4Q8IZF6 3080 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 A0A096LPE4 126 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 A0A1W2PPZ6 126 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 SH3D21A4FU49 640 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 SEC14L2O76054 403 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 CLDN1O95832 211 aa17.71■□□□□ 0.43
RHBDD3-201ENST00000216085 POLR2IP36954 125 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms