RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 F2RP25116 425 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SOX3P41225 446 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 TPPP2P59282 170 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RPS18P62269 152 aaKnown RBP5.63□□□□□ -1.51
VPS13D-201ENST00000011700 EVX2Q03828 476 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 RAB33AQ14088 237 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 HTR3DQ70Z44 454 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 ASB11Q8WXH4 323 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CRB3Q9BUF7 120 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 LMAN1LQ9HAT1 526 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 KCNK12Q9HB15 430 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 CA10Q9NS85 328 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 SPHK1Q9NYA1 384 aa5.63□□□□□ -1.51
VPS13D-201ENST00000011700 VWA8A3KMH1 1905 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 LRRC3CA6NJW4 275 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 C17orf105B2RV13 164 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TARM1B6A8C7 271 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 XRCC2O43543 280 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CYTIPO60759 359 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 FUT4P22083 530 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ACKR3P25106 362 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF582Q96NG8 517 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TXLNGYQ9BZA5 131 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 EBF1Q9UH73 591 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CD207Q9UJ71 328 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF223Q9UK11 482 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TRAV36DV7A0A075B6V5 113 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 A6NCN8 305 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 LIMS3P0CW19 117 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 LIMS4P0CW20 117 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 AREGP15514 252 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF44P15621 663 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ETV3P41162 512 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 DLK1P80370 383 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MAML2Q8IZL2 1156 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CMTM4Q8IZR5 234 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TOMM40LQ969M1 308 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 NOL4LQ96MY1 436 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 HDAC8Q9BY41 377 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 HSD3B7Q9H2F3 369 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 GNG12Q9UBI6 72 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MYO18BQ8IUG5 2567 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TEX50A0A1B0GTY4 177 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TM4SF1P30408 202 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CCL23P55773 120 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 REEP5Q00765 189 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 EMX1Q04741 257 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ADAMTSL4Q6UY14 1074 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 DPPA3Q6W0C5 159 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 SLC16A14Q7RTX9 510 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 NAXDQ8IW45 347 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TMEM151AQ8N4L1 468 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 WDR20Q8TBZ3 569 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 OR51I2Q9H344 312 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 SPANXA1Q9NS26 97 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TREX1Q9NSU2 369 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 KDM4EB2RXH2 506 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 YY2O15391 372 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 COCHO43405 550 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 RRASP10301 218 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 POLR2CP19387 275 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 C21orf33P30042 268 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MRPL19P49406 292 aaKnown RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TNFRSF17Q02223 184 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ZNF791Q3KP31 576 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 LY6G5CQ5SRR4 150 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 OR5M8Q8NGP6 311 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 GABARAPL1Q9H0R8 117 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 AAMDCQ9H7C9 122 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 HS3ST2Q9Y278 367 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TRAV1-2A0A0B4J238 106 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 A0A1W2PQ09 198 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ADM5C9JUS6 153 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 F5H5K5 113 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 C1orf105O95561 183 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MAOBP27338 520 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 SSR4P51571 173 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 YBX1P67809 324 aaKnown RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 HTRA4P83105 476 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 RNF175Q8N4F7 328 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ALG12Q9BV10 488 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 ALOXE3Q9BYJ1 711 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 MYOCOSA0A1B0GUC4 107 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 PPP1R11O60927 126 aaPredicted RBP5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TCN2P20062 427 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 GPR12P47775 334 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 PMPCAQ10713 525 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 KMT5CQ86Y97 462 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 SMIM19Q96E16 107 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 RNF2Q99496 336 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 VPS25Q9BRG1 176 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CABLES2Q9BTV7 478 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 HINT2Q9BX68 163 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 PRAMEF27A3QJZ7 478 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 TLCD2A6NGC4 264 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 CLDN1O95832 211 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 C8orf89P0DMQ9 161 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 GABRR1P24046 479 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 PRAMEF9Q5VWM5 478 aa5.62□□□□□ -1.51
VPS13D-201ENST00000011700 SLCO4A1Q96BD0 722 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms