RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 ZNF627Q7L945 461 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 ZNF595Q8IYB9 648 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 ESX1Q8N693 406 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 OR6N1Q8NGY5 312 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 HOXB13Q92826 284 aaPredicted RBP12.71□□□□□ -0.38
USH1C-201ENST00000005226 PMM1Q92871 262 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 ZNF578Q96N58 590 aaPredicted RBP12.71□□□□□ -0.38
USH1C-201ENST00000005226 EVA1AQ9H8M9 152 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 RABL2AQ9UBK7 228 aaPredicted RBP12.71□□□□□ -0.38
USH1C-201ENST00000005226 CPNE7Q9UBL6 633 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 RABL2BQ9UNT1 228 aa12.71□□□□□ -0.38
USH1C-201ENST00000005226 TDRD6O60522 2096 aaKnown RBP12.71□□□□□ -0.38
USH1C-201ENST00000005226 TRIOO75962 3097 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 TRBV5-7A0A0A0MS05 114 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 D6RAR5 112 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 ALOX12BO75342 701 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 PNPP00491 289 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 AKAIN1P0CW23 69 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 ALOX5APP20292 161 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 MAPK3P27361 379 aaPredicted RBP12.7□□□□□ -0.38
USH1C-201ENST00000005226 PRSS3P35030 304 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 DEFA5Q01523 94 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 UBXN2BQ14CS0 331 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 ELP2Q6IA86 826 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 LIN54Q6MZP7 749 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 STEAP1BQ6NZ63 245 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 PRR22Q8IZ63 422 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 GALNT16Q8N428 558 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 GPR148Q8TDV2 347 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 FAM3DQ96BQ1 224 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 ELOVL3Q9HB03 270 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 CGGBP1Q9UFW8 167 aaPredicted RBP12.7□□□□□ -0.38
USH1C-201ENST00000005226 SLC6A5Q9Y345 797 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 A0A1W2PQF6 199 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 EFCAB7A8K855 629 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 LDOC1O95751 146 aaPredicted RBP12.7□□□□□ -0.38
USH1C-201ENST00000005226 CSF1P09603 554 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 SDHAP31040 664 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 FAM109BQ6ICB4 259 aaPredicted RBP12.7□□□□□ -0.38
USH1C-201ENST00000005226 SLC43A2Q8N370 569 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 DPYSL5Q9BPU6 564 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 RTN4RQ9BZR6 473 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 COMMD4Q9H0A8 199 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 MMP25Q9NPA2 562 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 PCOLCE2Q9UKZ9 415 aa12.7□□□□□ -0.38
USH1C-201ENST00000005226 FARSAQ9Y285 508 aaKnown RBP12.7□□□□□ -0.38
USH1C-201ENST00000005226 FAM74A7A6NL05 159 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 WNT11O96014 354 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 HPP00738 406 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 NR0B2Q15466 257 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ETFDHQ16134 617 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 MEP1BQ16820 701 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 FAM74A3Q4VXF1 159 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 LY6G6FQ5SQ64 297 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 MED25Q71SY5 747 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ZNF546Q86UE3 836 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ZNF417Q8TAU3 575 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 TAAR8Q969N4 342 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ZNF75AQ96N20 296 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 OR10A5Q9H207 317 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 TMEM185BQ9H7F4 350 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 GDE1Q9NZC3 331 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 MRTO4Q9UKD2 239 aaKnown RBP12.69□□□□□ -0.38
USH1C-201ENST00000005226 HIF3AQ9Y2N7 669 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 A0A0J9YY10 115 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ZNF254O75437 659 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 KLF8O95600 359 aaPredicted RBP12.69□□□□□ -0.38
USH1C-201ENST00000005226 HOXB2P14652 356 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ZNF28P17035 718 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 MPGP29372 298 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 CALCRP30988 508 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 TPMTP51580 245 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ATG4DQ86TL0 474 aaPredicted RBP12.69□□□□□ -0.38
USH1C-201ENST00000005226 GABRG1Q8N1C3 465 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 SDR16C5Q8N3Y7 309 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 OR10K1Q8NGX5 313 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ST8SIA2Q92186 375 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 ELSPBP1Q96BH3 223 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 SLC38A3Q99624 504 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 MED9Q9NWA0 146 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 HRH3Q9Y5N1 445 aa12.69□□□□□ -0.38
USH1C-201ENST00000005226 DCDC2BA2VCK2 349 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 OR4E1P0C645 316 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 HPGDP15428 266 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 NTSR1P30989 418 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 CSF2RBP32927 897 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 MNDAP41218 407 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 SLC25A1P53007 311 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 GMFBP60983 142 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 NKPD1Q17RQ9 610 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 SCGB2B2Q4G0G5 96 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 CLEC1AQ8NC01 280 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 OR1J2Q8NGS2 313 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 SLC37A2Q8TED4 501 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 MCHR2Q969V1 340 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 MARC2Q969Z3 335 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 SLC25A36Q96CQ1 311 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 C4orf45Q96LM5 186 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 DGAT2Q96PD7 388 aa12.68□□□□□ -0.38
USH1C-201ENST00000005226 MICU1Q9BPX6 476 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms