RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Cd5P13379 494 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 TpoP35419 914 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Prox1P48437 737 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Psme3P61290 254 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Rps5P97461 204 aaKnown RBP10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 BcheQ03311 603 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Fbxo31Q3TQF0 507 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Klk1b21Q61759 261 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Tgoln1Q62313 353 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 CblcQ80XL1 496 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Sirt7Q8BKJ9 402 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Fignl1Q8BPY9 683 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Sec22cQ8BXT9 303 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Rae1Q8C570 368 aaKnown RBP10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Rab44Q8CB87 725 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Vmn1r183Q8K3N5 305 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 AcmsdQ8R519 336 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Sav1Q8VEB2 386 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Ing3Q8VEK6 421 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Olfr1260Q8VGN9 310 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Acsm1Q91VA0 573 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 NcaldQ91X97 193 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gmpr2Q99L27 348 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Tma16Q9CR02 221 aaKnown RBP10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Med18Q9CZ82 208 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Nde1Q9CZA6 344 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Rnf115Q9D0C1 305 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Fndc8Q9D2H8 321 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Coro7Q9D2V7 922 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Sf3a3Q9D554 501 aaKnown RBP10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 1700020A23RikQ9DA59 131 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Asf1bQ9DAP7 202 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Slc25a15Q9WVD5 301 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Tcf7l1Q9Z1J1 584 aa10.68□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Olfr896-ps1A0A1L1SRZ8 308 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Ttll3A4Q9E5 927 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm10376D3YXI8 184 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm3676D3Z236 184 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Zfp988F6VKC7 633 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Zfp989H3BLB0 661 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm21411J3KMS0 136 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm10375L7N286 184 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm3573L7N292 184 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Galnt4O08832 578 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Wdr1O88342 606 aaKnown RBP10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Cldn1O88551 211 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Hprt1P00493 218 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Igh-1aP01865 398 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Fosl2P47930 326 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Cd38P56528 304 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Rps4xP62702 263 aaKnown RBP10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Map2k6P70236 334 aaKnown RBP10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Zfp987Q32P14 633 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Micall2Q3TN34 1009 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Nkain2Q4PNJ2 208 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Cdkn2dQ60773 166 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Angptl1Q640P2 490 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Iqcf4Q6P8Y2 204 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Olfr1181Q7TR18 311 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Rsbn1Q80T69 795 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Thnsl2Q80W22 483 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gltpd2Q8K0R6 321 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Vmn1r23Q8R2D0 302 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Oasl1Q8VI94 511 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Dcp1aQ91YD3 602 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 DhddsQ99KU1 333 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Ndufab1Q9CR21 156 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 MrrfQ9D6S7 262 aaKnown RBP10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Tmem54Q9D7S1 219 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 1700001F09RikQ9DAR5 184 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Fezf2Q9ESP5 455 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Mid2Q9QUS6 705 aa10.67□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Med13lQ6JPI3 2207 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm10439A2AJU2 433 aaKnown RBP10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Glb1l3A2RSQ1 649 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gm6904E9PVF1 202 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Vmn2r101E9PZS9 857 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Mettl7a3G3X9G9 244 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Cdhr4H3BJZ2 783 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Vmn2r89O35199 507 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 CrygsO35486 178 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Ier2P17950 221 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Etv4P28322 485 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Hcls1P49710 486 aaKnown RBP10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Alox12eP55249 662 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Kcnn3P58391 732 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 H2-Q6P79568 326 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Prelid2Q0VBB0 177 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Slc25a33Q3TZX3 320 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Vezf1Q5SXC4 518 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Wdr34Q5U4F6 535 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Foxg1Q60987 481 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Dtx1Q61010 627 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Tff3Q62395 81 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Tas2r13Q7M720 305 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Olfr374Q7TRY0 313 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Sult2a8Q8BGL3 282 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Als2cr12Q8BVM7 383 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Gykl1Q8C635 549 aa10.66□□□□□ -0.7
Ccdc28a-202ENSMUST00000080860 Dlgap5Q8K4R9 808 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 30.5 ms