RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Slc35a3Q8R1T4 326 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Efcab11Q9D0E5 162 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Cthrc1Q9D1D6 245 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Slc35a4Q9D321 324 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Gm13762A2ATG2 311 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2abC0HKE1 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2acC0HKE2 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2adC0HKE3 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2aeC0HKE4 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2agC0HKE5 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2aiC0HKE6 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2anC0HKE7 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2aoC0HKE8 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2apC0HKE9 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Tmem44E9Q4M0 433 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 AanatO88816 205 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Bpifa2P07743 235 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Prkar1bP12849 381 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Sec61a1P61620 476 aaKnown RBP17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 DhpsQ3TXU5 369 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Nhlrc4Q3UP44 136 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Vdac3Q60931 283 aaKnown RBP17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist3h2aQ8BFU2 130 aaKnown RBP17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Slc6a17Q8BJI1 727 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Dusp28Q8BTR5 163 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hist1h2afQ8CGP5 130 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Pxdc1Q8JZU6 231 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Gm42417Q8K1D0 126 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 RfesdQ8K2P6 157 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 RergQ8R367 199 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Tmem185bQ8R3R5 350 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Asb13Q8VBX0 278 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Olfr558Q8VGZ7 317 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Olfr676Q8VGZ9 317 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Odf4Q8VI88 290 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Mrm1Q99J25 320 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Dusp22Q99N11 184 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Mrpl15Q9CPR5 295 aaKnown RBP17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Hrasls5Q9CPX5 270 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Med30Q9CQI9 178 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Q9CQT6 229 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Lingo1Q9D1T0 614 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Dapl1Q9D757 107 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Slc48a1Q9D8M3 146 aa17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Coro1bQ9WUM3 484 aaKnown RBP17.43■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Gm14085A2AWR5 660 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Olfr1224-ps1A3KGY4 311 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Cyp4a31F8WGU9 509 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Slc30a4O35149 430 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 mt-Co3P00416 261 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 FaslgP41047 279 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 GdnfP48540 211 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Nrsn2Q5HZK2 202 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Vmn1r196Q5SVD5 301 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ift52Q62559 426 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ubfd1Q78JW9 368 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Mgat4aQ812G0 535 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Mrgpra3Q91WW3 302 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 TMEM121BQ99MX7 572 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Cav2Q9WVC3 162 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Slc22a5Q9Z0E8 557 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ppp1r17Q9Z2E4 159 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Dennd4cA6H8H2 1906 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Col4a4Q9QZR9 1682 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Igkv6-20A0A140T8P2 115 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ndufaf6A2AIL4 333 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Saxo1B1AXP3 476 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Zfp707F6QUN2 391 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Vmn1r94K7N6X3 305 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Tmem178bM0QWJ9 172 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 CtslP06797 334 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Gstm2P15626 218 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Garem1Q3UFT3 876 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Olfr146Q60884 306 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Zfp82Q6P9Y7 530 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Kng2Q6S9I3 644 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Olfr205Q7TS37 305 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Vrk1Q80X41 440 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Rxfp3Q8BGE9 472 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Gpr61Q8C010 449 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 CenpxQ8C4X1 78 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Lrrn3Q8CBC6 707 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Gramd1cQ8CI52 457 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Slc39a8Q91W10 462 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Dusp12Q9D0T2 339 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Spaca7Q9D2S4 182 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ptp4a3Q9D658 173 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Clec3aQ9EPW4 196 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 MNCb-2990Q9JJ93 142 aa17.42■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 PrnA0A075B668 197 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Zfp873A0A1B0GT64 667 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Prps1l3G3UXL2 318 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Prl8a2O54832 240 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 H2-Q9P14431 200 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Wnt11P48615 354 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ccr4P51680 360 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Adam5Q3TTE0 751 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Pcp4l1Q6W8Q3 68 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Cpt1cQ8BGD5 798 aa17.41■□□□□ 0.38
Ccdc50-201ENSMUST00000039443 Ube3dQ8BX13 368 aa17.41■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms