RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gpr18Q8K1Z6 331 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc35e4Q8K3D6 351 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Grhl2Q8K5C0 625 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn1r228Q8R2A7 333 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr799Q8VGI7 311 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr558Q8VGZ7 317 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mrgpra3Q91WW3 302 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Efcab11Q9D0E5 162 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ccdc167Q9D162 97 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Pycr3Q9DCC4 274 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr27Q9EQ90 311 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fzd2Q9JIP6 570 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ccnl2Q9JJA7 518 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Crybg1A0A0G2JG52 2065 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gm42372A0A1B0GT27 204 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Tmsb15aA2AEH9 79 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Tmem182B2RVY9 229 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2abC0HKE1 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2acC0HKE2 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2adC0HKE3 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2aeC0HKE4 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2agC0HKE5 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2aiC0HKE6 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2anC0HKE7 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2aoC0HKE8 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2apC0HKE9 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn2r101E9PZS9 857 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Oosp3G5E8D7 195 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ntn1O09118 604 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 CtssO70370 340 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Igsf6P0C6B7 237 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Msx1P13297 303 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Agtr1aP29754 359 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 2410002F23RikQ3TE80 284 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr429Q7TRW1 312 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ttc29Q80VM3 471 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Crls1Q80ZM8 303 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Zfand1Q8BFR6 268 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist3h2aQ8BFU2 130 aaKnown RBP12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Atg4dQ8BGV9 474 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Coro2bQ8BH44 480 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Frmd6Q8C0V9 622 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Pars2Q8CFI5 475 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hist1h2afQ8CGP5 130 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rdh1Q8CGV4 317 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cml2Q8CHQ9 238 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Scmh1Q8K214 706 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Thap7Q8VCZ3 309 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr883Q8VF64 309 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr993Q8VF75 314 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mat1aQ91X83 396 aaKnown RBP12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Tomm34Q9CYG7 309 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gm10762Q9CZN6 115 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ttyh1Q9D3A9 450 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 RetnlaQ9EP95 111 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fgf21Q9JJN1 210 aa12.29□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr560A0A1B0GSU5 314 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1109A2AT96 312 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gm21876F6XK35 94 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Speer4eK7N6S8 255 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gm8281L7N235 204 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gm8050L7N2E3 205 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Tmco2P0C1V4 183 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Zfp59P16373 634 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rce1P57791 329 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Adamts15P59384 950 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Cass4Q08EC4 804 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Mccc2Q3ULD5 563 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Them4Q3UUI3 230 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Krt33bQ61897 404 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 NnatQ61979 81 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Muc19Q6JHY2 733 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Carns1Q6ZPS2 827 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rps27Q6ZWU9 84 aaKnown RBP12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Avl9Q80U56 649 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rell2Q8BRJ3 303 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 PcgF3Q8BTQ0 241 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 SbsnQ8CIT9 700 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Vmn1r72Q8K3N7 306 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1241Q8VF91 314 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr73Q920P2 313 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Ptp4a3Q9D658 173 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Scamp2Q9ERN0 329 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Scn2aA0A0J9YTW6 2006 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Aadacl3A2A7Z8 408 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1095A3KPP7 308 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Sult2a3D3Z1W5 285 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 GmlE9PX31 176 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 OtpO09113 325 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Hdac3O88895 424 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Fgf3P05524 245 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Prkar1bP12849 381 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Crisp2P16563 243 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Pax2P32114 414 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Rps15aP62245 130 aaKnown RBP12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Gabra1P62812 455 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Slc2a9Q3T9X0 538 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Bloc1s3Q5U5M8 195 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr1106Q7TR57 312 aa12.28□□□□□ -0.44
Nup88-201ENSMUST00000035283 Olfr17Q7TRM9 315 aa12.28□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 154.9 ms