RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Nup107Q8BH74 926 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gm4922Q8C0N0 497 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cyp51a1Q8K0C4 503 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Babam2Q8K3W0 383 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 BanpQ8VBU8 548 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Emc4Q9CZX9 183 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Efcab11Q9D0E5 162 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cpn1Q9JJN5 457 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Tyk2Q9R117 1184 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Deaf1Q9Z1T5 566 aa20.86■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2abC0HKE1 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2acC0HKE2 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2adC0HKE3 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2aeC0HKE4 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2agC0HKE5 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2aiC0HKE6 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2anC0HKE7 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2aoC0HKE8 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2apC0HKE9 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cops3O88543 423 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Zfp26P10076 861 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 GalP47212 124 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Olfr598Q7TRR2 319 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist3h2aQ8BFU2 130 aaKnown RBP20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2afQ8CGP5 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2ahQ8CGP6 128 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Hist1h2akQ8CGP7 130 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Polr2hQ923G2 150 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Ferd3lQ923Z4 168 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Bhlhe41Q99PV5 410 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Rprd1bQ9CSU0 326 aaKnown RBP20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Pde7bQ9QXQ1 446 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 AtmQ62388 3066 aa20.85■□□□□ 0.93
Cln6-201ENSMUST00000034776 Ddi2A2ADY9 399 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gm20489A2AGH5 449 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gsg1lD3Z7H4 322 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gm8127E9Q0P0 100 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gm8094K7N6U8 211 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 MdkP12025 140 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 FshrP35378 692 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gmeb2P58929 530 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Lpar5Q149R9 372 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Fbxo31Q3TQF0 507 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Slc6a7Q6PGE7 637 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Olfr884Q7TRE1 309 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Znf8Q8BGV5 572 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Peli1Q8C669 418 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cacnb4Q8R0S4 519 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Glyr1Q922P9 546 aaKnown RBP20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 IqchQ9D2K4 1071 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Gpc6Q9R087 555 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Nfkb2Q9WTK5 899 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Padi1Q9Z185 662 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Skint9A7TZG3 319 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Vmn2r16E9Q025 850 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Trim15G3UY57 292 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Vmn2r89O35199 507 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Klk1b11P15946 261 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cdc25bP30306 576 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Abcd3P55096 659 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Btbd3P58545 530 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Acta2P62737 377 aaKnown RBP20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Actg2P63268 376 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Jazf1Q80ZQ5 243 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Mettl27Q8BGM4 238 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Vmn1r17Q8R2D8 303 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Olfr1484Q8VEU6 315 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Olfr51Q8VGG9 307 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Slc27a4Q91VE0 643 aaKnown RBP20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 BmfQ91ZE9 185 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Slc6a19Q9D687 634 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cts8Q9JI81 333 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 Slc30a7Q9JKN1 378 aa20.84■□□□□ 0.93
Cln6-201ENSMUST00000034776 A630095N17RikJ3KMM7 116 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Ighg1P01869 393 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Cdh11P55288 796 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Dgcr2P98154 548 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Mier2Q3U3N0 541 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Olfr3Q60879 313 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Acvr1bQ61271 505 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Zfp157Q6PCM4 567 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Zfp748Q7TPL6 888 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Zfp9Q8BIS1 454 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Swi5Q8K3D3 89 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Asb10Q91ZT7 467 aa20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Ddx28Q9CWT6 540 aaKnown RBP20.83■□□□□ 0.93
Cln6-201ENSMUST00000034776 Ighv1-42A0A0A6YY38 117 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Scgb2b3D2XZ38 112 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 ApodP51910 189 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Cass4Q08EC4 804 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Nxpe2Q3U095 558 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Rnf149Q3U2C5 394 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Ube2zQ3UE37 356 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Cdk10Q3UMM4 360 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Lingo2Q3URE9 606 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 MeikinQ5F2C3 434 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Mfsd8Q8BH31 519 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Tns4Q8BZ33 696 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Zc3h3Q8CHP0 950 aa20.83■□□□□ 0.92
Cln6-201ENSMUST00000034776 Vmn1r32Q8R2D9 302 aa20.83■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms