RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 IMPAD1Q9NX62 359 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 TVP23BQ9NYZ1 205 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 CRIM1Q9NZV1 1036 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 KLHL9Q9P2J3 617 aa8.33□□□□□ -1.08
PHGDH-228ENST00000641847 IGKV3D-15A0A087WSY6 115 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 LOC102725191A0A1B0GVB3 256 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 NPIPB13A6NJU9 1138 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF716A6NP11 495 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 AHRRA9YTQ3 701 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 NPIPB4C9JG80 1138 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 IMPA2O14732 288 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ARPC3O15145 178 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SURF4O15260 269 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 AKAP8O43823 692 aaKnown RBP8.32□□□□□ -1.08
PHGDH-228ENST00000641847 PRKYO43930 277 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 WDR1O75083 606 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 AQP8O94778 261 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SLC2A10O95528 541 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 TGM6O95932 706 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 IFNGP01579 166 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 HMGN1P05114 100 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 GNAO1P09471 354 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 GABRA1P14867 456 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ACVR2AP27037 513 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ACVR1BP36896 505 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 PCYT1AP49585 367 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SLC16A1P53985 500 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 RPL27P61353 136 aaKnown RBP8.32□□□□□ -1.08
PHGDH-228ENST00000641847 IL5RAQ01344 420 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 RASGEF1BQ0VAM2 473 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 IL18R1Q13478 541 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SLC17A1Q14916 467 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 RNPS1Q15287 305 aaKnown RBP8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.083e-16■■■■■ 41.5
PHGDH-228ENST00000641847 SNAPC1Q16533 368 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 MESTQ5EB52 335 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 EMC4Q5J8M3 183 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SLC35F1Q5T1Q4 408 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 FAM205BPQ63HN1 556 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 GPR139Q6DWJ6 353 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 B3GNT6Q6ZMB0 384 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 USP51Q70EK9 711 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 FAM122BQ7Z309 247 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 JAZF1Q86VZ6 243 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 C8orf59Q8N0T1 100 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-228ENST00000641847 DEPDC4Q8N2C3 294 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SETD9Q8NE22 299 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 SDR9C7Q8NEX9 313 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF519Q8TB69 540 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ASB10Q8WXI3 467 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 TMEM158Q8WZ71 300 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 PLEKHA8Q96JA3 519 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 CNBD2Q96M20 576 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ANKRD60Q9BZ19 345 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 TXNIPQ9H3M7 391 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 MED29Q9NX70 200 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 GRHPRQ9UBQ7 328 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 KLHL21Q9UJP4 597 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ING1Q9UK53 422 aaPredicted RBP8.32□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF346Q9UL40 294 aaKnown RBP8.32□□□□□ -1.08
PHGDH-228ENST00000641847 CLEC4AQ9UMR7 237 aa8.32□□□□□ -1.08
PHGDH-228ENST00000641847 HCFC1P51610 2035 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 A6NIZ1 184 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 CD8B2A6NJW9 211 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 RIIAD1A6NNX1 92 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 H7C1C5 153 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 H7C1Q1 480 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 XKRYO14609 159 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 SMAD7O15105 426 aaKnown RBP8.31□□□□□ -1.08
PHGDH-228ENST00000641847 IDH3BO43837 385 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 GOSR1O95249 250 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 TXNDC12O95881 172 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 BCL10O95999 233 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 HIST1H1CP16403 213 aaKnown RBP8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF3P17036 446 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 MYF6P23409 242 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 BIDP55957 195 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 CLDN17P56750 224 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 RAP1BP61224 184 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 LCN6P62502 163 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 RAP1AP62834 184 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.31□□□□□ -1.08
PHGDH-228ENST00000641847 CRMP1Q14194 572 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 DAZAP2Q15038 168 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-228ENST00000641847 PDK3Q15120 406 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 Q5PR19 223 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ARMC4Q5T2S8 1044 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 NSUN5P2Q63ZY6 315 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 LEG1Q6P5S2 330 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 PTCHD4Q6ZW05 846 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 CREB3L2Q70SY1 520 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 HDDC2Q7Z4H3 204 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ADCK1Q86TW2 530 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ENTHD1Q8IYW4 607 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ARIH2OSQ8N7S6 290 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 C9orf106Q8NAJ2 232 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 NOXO1Q8NFA2 376 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 OR52E2Q8NGJ4 325 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 OR4K13Q8NH42 304 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 WNT2BQ93097 391 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms